Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02011 ATGGGAATAGAGCGCGTGCAGTGTGACTATGTCTCTCTGGACGAAACCTTCGAAATTGGAAAAGAGAAGTATCACGGTCAACAGTACTGCCATATTTACTTCGCACGCCTTCATTTGATGCGGACTCTCTTGTATTCACTCGTTCCTCACTGGAAACCTAATTTTCCCGTGTGCACGGTGTTGGAATTGGAAGAGGGCAAGGAATGTGTCATTGTTGGAACCCTCTACAAACACATGAAGCTCAAACCTCGCGTACTTGATGAGTATTCTAAGCAGAAATCAGTGGTTCCACTTGTCAAGCCACATAACTTCATGCACTCTGATGATTACCTAGTTTTGGAAGATGAAAGTGGGCGGGTTAAGCTCAGCGGAAATATCATTCCGCCTGAATATGTAACAGGAATTGTGGTCGCTGTACTTGGAAAGGAAAGTGGGGCAGGTGACTTTTTGGTTCAGGATGTACTAGATGCTGGCTTACCCCCACAGATAGAATTCCCCCTTAAATCAGGGGAAGACAAATACGTTGTTCTTGTGTCAGGTTTAAGTGTTGGTAGCAGCACCTCTAATCCTCTTCAGTTTCAGCTTCTCATTGATCATATTACGGGGCATTTAGGGGATGAGAAGGCACAACTTTTTGCATCAAAAATTGTTCAAGTTGTCTTTGCTGGGAATTTAGTTGAGATACCTCACAGAATTCTTAATGGACAGAATTTGGCTTCAGAAGATTTTGCAAGAATGTCTGAGCCAATAAGGGAGCTAGACATTCTGTTGAGTCAGATAGCTGCTGGTTTGCCTTTGGATATTATGCCAGGACCCAGTGACCCTGCGAATTTCTCATTGCCACAACAGTCATTGCATGAATGCCTTTTCCCTGGGTCATCATCGTATAATACTTTCAGATCCTGTACAAATCCTCATTGTTTTGAGCTTGATAATGTCAGGTTTCTTGGGACATCCGGTCAAAATGTAGATGATCTTGACAAATATTCAGATGCAAAAGATAAACTTGAATTCATGGAAAGGACATTAAGATGGAGGCATTTAGCACCCACCGCACCTAATACTCTTGGGTGCTTTCCTTTTACTGAGAGGGATCCTTTCTTCATTGAGAGTTGTCCTCACGTTTACTTTGTTGGAAATCAAGATAAATTTGAAACTCGTATCATAAAGGGATCAGAAGGGCAGTTGGTGAGACTCATATGTGTTCCTAAATTCAGTGAAACTGGAGTTGCTGTTATGGCAATGGATTGTTGTCCCTCTGAACGTACTAACGAGACTCACTTTAGGCATTTCATTGCAGTCTATTTAATCTTTAGAATGGGTTTCTAA 1329 0.4206 MGIERVQCDYVSLDETFEIGKEKYHGQQYCHIYFARLHLMRTLLYSLVPHWKPNFPVCTVLELEEGKECVIVGTLYKHMKLKPRVLDEYSKQKSVVPLVKPHNFMHSDDYLVLEDESGRVKLSGNIIPPEYVTGIVVAVLGKESGAGDFLVQDVLDAGLPPQIEFPLKSGEDKYVVLVSGLSVGSSTSNPLQFQLLIDHITGHLGDEKAQLFASKIVQVVFAGNLVEIPHRILNGQNLASEDFARMSEPIRELDILLSQIAAGLPLDIMPGPSDPANFSLPQQSLHECLFPGSSSYNTFRSCTNPHCFELDNVRFLGTSGQNVDDLDKYSDAKDKLEFMERTLRWRHLAPTAPNTLGCFPFTERDPFFIESCPHVYFVGNQDKFETRIIKGSEGQLVRLICVPKFSETGVAVMAMDCCPSERTNETHFRHFIAVYLIFRMGF 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02011 442 FunFam DNA polymerase delta subunit 2 34 157 - -
Vian2g02011 442 PANTHER DNA POLYMERASE DELTA SUBUNIT 2 5 413 IPR024826 -
Vian2g02011 442 Gene3D - 166 430 - -
Vian2g02011 442 CDD MPP_PolD2_C 174 412 IPR041863 -
Vian2g02011 442 FunFam DNA polymerase delta small subunit 160 425 - -
Vian2g02011 442 Pfam DNA polymerase alpha/epsilon subunit B 175 385 IPR007185 GO:0003677|GO:0006260
Vian2g02011 442 Gene3D - 35 157 - -
Vian2g02011 442 Pfam DNA polymerase delta subunit OB-fold domain 28 154 IPR040663 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02011 4 412 Core DNA Replication Machinery Family AT2G42120 73.659 0.0 645
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02011 K02328 - gmx:100780072 751.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02011 2 39748110 39752609 Vian2g02011 2 39748110 39752609 ECH