Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02004 ATGATCAACGTGAAACGCGAACTGGACGGTGATGGTGATTGCAGTAGCATCGACAAGCGTGATTCTGAACTCCACGCCGTAAGCGACGACGCTGATTACAAAACTCGGAAACGCCGTCGAGGTATTCGTTCTCGGTATCTGGCCTTCAAGAACATGATTCAAGATGAAAGGGAAGAAATTGCTAGGCCTGATTCTAACAAGTTCGATTTGATCTTTAGTGAAATGGAGAGCTTACATCAGCAAGTTACAAAACCAAGAGAACAAGTAGCTGACGCAAAGGCTCTTTTGGAAATCACCCAATCCCTGGTAATGTCTGTGAGAACTACTGCGAATGGCGGACTAACTCCTTCAGACTTTGTTACACACATTCTTAAAAAGTTCGGAGGACATGTTGGACCAAGTAATAGCACAGAAGATTGCAATAGAAATTCAGTAGCTTGGAATGATATTGGAGTTGCGGTGTCACATGTTTTTAGAGCAGGTTATGGGTGCTGTACAATGATGGCCCCAATGGATGCTAAAATAGAGCAGAGGAAGGTCATTAATCGTCGAAAGCGTGTGAGACCAACTGAATTGGCACGGCCTGAAGAGCTATGTGGAGGTTCAGGGGAAGAGATAGCGGAGACCGATAAGCATATGTTAACGATGTTTAACATCTTAAGGATCAATAAAGTTGTCAAGCTTGAAAATCTGGTTTTGAATCGGAACTCATTTGGACAAACCGTGGAGAATTTATTTGCTTTATCCTTTTTAGTCCGAGATGGTCGGGCTGAAATAAAAGTTAACGAGTCTGGATGGCAACTAGTTTCGCCTAGGAACGCTCCTGCTGCAAATTCAGTTGTTTCTGGGGATGTTGCTTTTAGCCATTTTGTTTTCCGATTTGACTTCAACGATTGGAAGTTGATGGTTGGCACTGTTAGGGTTGGAGAGGAGCTGATGCCTCATAGGAACAGTGAATCACAGAGATAG 969 0.4355 MINVKRELDGDGDCSSIDKRDSELHAVSDDADYKTRKRRRGIRSRYLAFKNMIQDEREEIARPDSNKFDLIFSEMESLHQQVTKPREQVADAKALLEITQSLVMSVRTTANGGLTPSDFVTHILKKFGGHVGPSNSTEDCNRNSVAWNDIGVAVSHVFRAGYGCCTMMAPMDAKIEQRKVINRRKRVRPTELARPEELCGGSGEEIAETDKHMLTMFNILRINKVVKLENLVLNRNSFGQTVENLFALSFLVRDGRAEIKVNESGWQLVSPRNAPAANSVVSGDVAFSHFVFRFDFNDWKLMVGTVRVGEELMPHRNSESQR 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02004 322 PANTHER UNCHARACTERIZED 31 321 IPR027786 GO:0005634|GO:0006281|GO:0030915
Vian2g02004 322 Pfam Nse4 C-terminal 226 313 IPR014854 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02004 Vian-Chr2 39692061 39695526 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02004 39 318 Non-SMC Element family AT1G51130 50.890 1.05e-96 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02004 K22825 - gmx:100781485 478.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02004 2 39692061 39695526 Vian2g02004 2 39692061 39695526 ECH