Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01995 ATGGCAGGAACTGGTTTCTACACTTCCTGTCTTTCCTCTTCCAGCAACTTAGGGGCATGTTGGTTGGTATTAAAAACTCACAATGCAAGGGCCCTGCCAGGGAAACTACCTGGAACTGGAATGAGAAGATTGGCAATAAGAGCAGAAGTTGAATTTGTGAACGCTGACAAGGCGAAGGAACTTGTAGAAGTGGATGGGTATGCTGTTCTTGATGTGAGGGACAAGAATCAATTTGAACGAGCTCACATAAAATCTTGTAGTCATGTGCCTCTTTTTATTGAAAACAAAGACAATGATCCTGGTACTATTATCAAAAGGCAACTGCACAATAACTTTTCTGGGTTGTTCTTTGGGTTGCCATTCACTAAGCCAAATCCTGATTTTATACAATCTGTTAAGACCCAGTTTCCACCTGAAAGTAAACTCTTGGTTGTGTGCCAGGAAGGACTGAGGTCTGCTGCTGCAGCAGATAAGTTAGAGAAAGCTGGTTATGAAAATATAGCATGCATAACATCTGGCCTTCAAACCGTAAAACCAGGGACATTTGAGTCTGTAGGGTCCACAGAGTTGGAGAATGCAGGCAAAGCTGGTTTGGTGACAATCCAAGGAAAAATCTCAACTGTGTTGGGAACGATTCTTGTTTGTGCATATATATTCGTTACATTCTTCCCTGAGCAAGCAGAGAAGCTATTCCAATTGGCCCCTACAGGATAA 714 0.4244 MAGTGFYTSCLSSSSNLGACWLVLKTHNARALPGKLPGTGMRRLAIRAEVEFVNADKAKELVEVDGYAVLDVRDKNQFERAHIKSCSHVPLFIENKDNDPGTIIKRQLHNNFSGLFFGLPFTKPNPDFIQSVKTQFPPESKLLVVCQEGLRSAAAADKLEKAGYENIACITSGLQTVKPGTFESVGSTELENAGKAGLVTIQGKISTVLGTILVCAYIFVTFFPEQAEKLFQLAPTG 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01995 237 ProSiteProfiles Rhodanese domain profile. 63 186 IPR001763 -
Vian2g01995 237 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 48 175 IPR036873 -
Vian2g01995 237 SMART rhod_4 53 183 IPR001763 -
Vian2g01995 237 Pfam Rhodanese-like domain 55 175 IPR001763 -
Vian2g01995 237 FunFam Rhodanese-like domain-containing protein 9, chloroplastic 40 182 - -
Vian2g01995 237 Gene3D - 42 182 IPR036873 -
Vian2g01995 237 CDD RHOD 58 178 - -
Vian2g01995 237 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 9, CHLOROPLASTIC 1 236 IPR044615 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01995 Vian-Chr2 39597809 39599374 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01995 9 231 Sulfurtransferasese or Rhodanese AT2G42220 67.713 5.94e-111 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01995 - - vum:124827221 471.47