Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01986 ATGGCTGATTACCAAGACTACATCCTTCTTTTCATCACATTTTTAGTCTCCACATTCGTGGTTCGAGCCATACTCAGCAGAAAACAAAACAAGACTAATAATAGACCACCAAGTCCACGAGCCTTACCCATCATTGGACATCTCCACCTTCTGGCTCCAATACCTCACCAGGCTCTTCACAAGCTCTCTACTCGCTATGGTCCCATAATGCACCTTTTCCTTGGCTCCGTCCCTTGTGTCGTCGCTTCCACGCCAGAAGCTGCCAGAGAATTCCTAAAAACTCACGAAACCCGTTTCTCCAACCGCCCGCAAAGTTCTGCAGTTGATTTTCTGACATACGGCTCCCAGGACTTCTCTTTTGCGCCATATGGACCTTATTGGAAGTTCATGAAGAAAATATGCATGTCTGAACTTCTGGGGGGTTCCACGTTAAGTCAGCTACTTCCTGTGAGGAGACAAGAGACGATAAGGTTTCTGAGGCTTATGCTCAAGAAAGGGAAGGCGGGTGAGGCTGTTGATGTTGGGGGCGAACTTCTAAGACTCTCGAATAACGTTGTGTCGAGGATGATTATGAGCCAAACATGTTCCGAAGATGACAGTGAAGCCGAAGAGGTGAGGAAGTTGGTGCAAGACACTGTTCTTCTCACGGGGAAGTTTAATGTGTCGGATTTCGTTTGGTTCTTTAAGAACTGGGACGTGCAGGGGTTCGGGAAGAGACTGAAGGAAATTCGGGACAGGTTTGACACCATGATGGAGAGGGTGATCAAGGAGCATCAAGAGGAAAGAAAGAAGAGAAAGGAAGTGGGAAGAGGAAGAGATGATGATCAAATCAAGGATCTACTTGATGTGTTATTGGACATACATGAAGATGAGAACTCTGACATAAAATTGACAAAAGAGAAGATAAAGGCCTTCATCTTGGTAAGTCCACTTTCTGTGGCTAAAATTTCGTTGACTTCAATTTCAAGAAATTTTTGTGTTGGATCCAAAATTTGTGGAACATGA 1005 0.4488 MADYQDYILLFITFLVSTFVVRAILSRKQNKTNNRPPSPRALPIIGHLHLLAPIPHQALHKLSTRYGPIMHLFLGSVPCVVASTPEAAREFLKTHETRFSNRPQSSAVDFLTYGSQDFSFAPYGPYWKFMKKICMSELLGGSTLSQLLPVRRQETIRFLRLMLKKGKAGEAVDVGGELLRLSNNVVSRMIMSQTCSEDDSEAEEVRKLVQDTVLLTGKFNVSDFVWFFKNWDVQGFGKRLKEIRDRFDTMMERVIKEHQEERKKRKEVGRGRDDDQIKDLLDVLLDIHEDENSDIKLTKEKIKAFILVSPLSVAKISLTSISRNFCVGSKICGT 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01986 334 Gene3D Cytochrome P450 25 315 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g01986 334 Pfam Cytochrome P450 36 307 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g01986 334 SUPERFAMILY Cytochrome P450 32 307 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g01986 334 PANTHER CYTOCHROME P450 93A3-LIKE 11 311 - -
Vian2g01986 334 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g01986 334 PRINTS E-class P450 group I signature 322 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g01986 334 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01986 Vian-Chr2 39482177 39483181 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01986 1 307 Cytochrome P450 AT5G06900 46.926 9.89e-95 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01986 K24188 - pvu:PHAVU_001G1395001 536.184