Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01985 ATGGATGCAGCTGGTGCTACCTTTTTGAGTTACATCATCTCGTTCTCCTTAGCCTTCCTTGTTTTGACTCTACTTTTCAAGTCCCTTAGCATTTTAAGAACCAAAAATGGCAGTGTTCGACCTCCACCAACTCCACCGTCACTTCCCATCATCGGCCATCTCCACCTTGTGGGTTCCGTCGTCCCAAAATCATTCCAAGTTCTGGCTCGTCAATATGGCCCTCTCATTCAGCTCCGTTTAGGTGCCTCAACATGCGTAGTTGTCTCCAACGCCCAAGTCGCCAAAGAAGTGATGAAAACGCATGACCTCAATTTCTGCAACCGACCCCAGTTTGGATCCGCAGACAACTTCTTATACAAAGGTTCTAGTTTCGTCACTGTCCCATATGGCCCTTATTGGCGCTTCATCAAGAAGCTTTGCGTTACTCAGCTTCTCTCCACAACGCAGTTTGGGCGCTTCCGGCACATCAGAGAGCAGGAGATACATAAGCTCTTGAAATCTCTTGCGGAGTGTTCCTCCGAAGGAAGGGACACGGATTTGAGCCATGAACTCACTGCTTTGACCAACAACATCCTGTGTCGGATGGCCATGAGTACGAGCTGTTTGGACAACGTTAACGATGCCGAGGATATTCTTGGCCTGGTGAGGGAGTTCATGCACTTAGGAGCTAAGTTGAGCATGGGTGAAGTGTTGGGAAAGTTTGACTTGTTTGGGTATGGGAAGAAGCTTGCTAGAGTAGTTGGCAAATTCGATCAGGTTTTGGAGCGCATCTTAGAGGAACATGAAGTGAAAAACTCCGAAAGAGGAGACATGATGGATATTCTACTGCGAGTCCACAAAGATCCTAATGCTGAAATGAAGTTAACAAGGAATGATATCAAGGCCTTCTTCCTGGATATTTTCCTAGCGGGAACAGACACGTCTTCAACAGCGTCCCAATGGGCCATGGCAGAAATCATGAACAACCCAGGAGTGTTGAGGAAGGTGAGGGCAGAGATTGATGCAGTGGTGGGTTATAGCCGGTTGGTCACTGAATCAGACCTTCCAGATCTTCGTTATCTCCAAGCTGTTGTGAAGGAAGTTCTAAGACTCCACCCAACAGCACCGTTTGCTCTTAGAGAATCGGCAGAGGACTGCACCATCAACGGGTATGGTATAAAGGGCCAGACACGGACACTGATCAATGTGTACGCCATCATGCGGGACCCAGAAGCGTGGGCCAACCCAGAGGAGTTTATACCAGAAAGGTTCTTGGAAGACAGTGATGGGATGAAGGGTGGAGCTGAAGGCATAACTACAATGAACGGTGGTGATTTCAGGTACCTTCCATTTGGGTCTGGGAGGAGGGGATGCCCTGGATCTTCCCTTGCCTTAACTGTCATACAAGTGACAGTTGCATCACTGATCCAATGTTTTGAATGGAAGACCAAAGAGGGAGAGAGGGTTTGTTTGGAAGAAGGGTCATCATTTTCTACAGGATTGGCAAAGCCACTTGTTTGTTATCCTGTTACTCGTTTTACTCCTTTTTAA 1530 0.4765 MDAAGATFLSYIISFSLAFLVLTLLFKSLSILRTKNGSVRPPPTPPSLPIIGHLHLVGSVVPKSFQVLARQYGPLIQLRLGASTCVVVSNAQVAKEVMKTHDLNFCNRPQFGSADNFLYKGSSFVTVPYGPYWRFIKKLCVTQLLSTTQFGRFRHIREQEIHKLLKSLAECSSEGRDTDLSHELTALTNNILCRMAMSTSCLDNVNDAEDILGLVREFMHLGAKLSMGEVLGKFDLFGYGKKLARVVGKFDQVLERILEEHEVKNSERGDMMDILLRVHKDPNAEMKLTRNDIKAFFLDIFLAGTDTSSTASQWAMAEIMNNPGVLRKVRAEIDAVVGYSRLVTESDLPDLRYLQAVVKEVLRLHPTAPFALRESAEDCTINGYGIKGQTRTLINVYAIMRDPEAWANPEEFIPERFLEDSDGMKGGAEGITTMNGGDFRYLPFGSGRRGCPGSSLALTVIQVTVASLIQCFEWKTKEGERVCLEEGSSFSTGLAKPLVCYPVTRFTPF 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01985 509 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g01985 509 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g01985 509 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g01985 509 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g01985 509 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g01985 509 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g01985 509 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g01985 509 FunFam Cytochrome P450 family protein 33 500 - -
Vian2g01985 509 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g01985 509 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g01985 509 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g01985 509 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g01985 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
Vian2g01985 509 Gene3D Cytochrome P450 29 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g01985 509 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 20 491 - -
Vian2g01985 509 CDD CYP93 73 502 - -
Vian2g01985 509 SUPERFAMILY Cytochrome P450 39 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g01985 509 Pfam Cytochrome P450 42 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01985 Vian-Chr2 39475441 39477151 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01985 1 509 Cytochrome P450 AT2G42250 52.031 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01985 - - gmx:106794180 753.436