Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01958 ATGGCCGAATTATTTCTCTTTAGCATAGCAGAGTCACTCATAGCAAAGCTTGCTTCTCATGCTTTTCAAGAAGCTTATCGAGTGGTGGGTTTATACCACGATCTTCGAAACCTTAGAAAGACTCTCTCTTTAGTCAAGGCTGTTCTGTTAGATGCTCAGCAAAAGCAAGATCACAACCATCAACTCCGCGAATGGCTCACTCACCTTAAAACTGTCTTCTCCGAAGCCGAAGATGTTTTGGATGAATTTGAGTGTCAAACACTGCAAAATAAACTGGTCAAAGCTCATGGTAACACCAAAGACAAGGTAAGTCACTTCTTCTCCACTTCTAATCCACTTCTTTTTCGCTACAAGATGACACAAAAAATTAAATATATCAACAAAAGACTAGACAAGGTTGCAGCGCATAGGCATAAGTTTAGTCTTCAAATAATTGATGTTGACACACGTGTTGTTTATCGGAGAGATATGACACACTCTCGTGTGAGTGATTCAGATGTGATTGGAAGGAAAAACGATAAAGAAAAGATGATAGAACTTTTGATGCAGCAGAATCCTAATGATGATGATACAAGTCTATCTGTTATCCCCATTGTGGGGATTGGAGGCTTGGGAAAGACTACACTTGCAAAGTTTGTGTTCAATGACAACAGGATCCAGGAATGCTTCCCATTGAAGATGTGGGTGTGTGTTTCTGATGAGTTTGACATTAAGCAACTTATTATCAAAATCATCAATTCTGCCAATGATGAAAATGTTCCTCCTCACCAACAGAATTTGAGCATGTTGGATATGGAGCAACTGCAAAACCAATTGAAAAGAAAACTTTCCGGTCAAAAATTCTTACTCGTACTGGACGACGTATGGAACGAAGAGCGTGTTAAATGGGTTGAGTTGAGGAATTTAATCCAAGTAAGTGGAGCAGGAAGTAAAGTTGTAGTGACCACACGTAGTCATTCGATTGCTTCCATGATGGGTACAGTTCCCTCTCACATTTTAGAAGGTCTTTCTGAGCAGGATTCTTTGTCTGTGTTTGTCAAGTGGGCATTTAAAGAAGGAGAGGAGGAAAAGCATCCTCACTTAGTAAATATTGGCAGAGAAATTGTGAAAAAATGCAGAGGGGTTCCATTGGCAGTGAGAACATTAGGTAGTTTACTATTCTCGAAATTTGAGGACAGTGAATGGGAATATGTGAGTGACAATGAAATCTGGAATTTGCCTCAGAAAAAGGATGACATTTTACCTGCCCTTAAACTGAGTTATGATCTCTTGCCATCCTATTTGAGGCAATGTTTTGCATTGTTTTCCCTTTACCCAAAGGATTATTTATTCCCTAGCTATGAAATAGCTGCGATTTGGGGGTCACTTGGACTCATTGCACTACCAAAAACGAGTAGGACACTTGAAGACGTGGCAAATCAATATTTGCATGAACTCTTGTCAAGATCCTTTCTCCAAGATTTTGAAACCTTTGGCACTATTTTTAGGTTTAGAATACATGATTTGGTGCATGATCTCGCCCTATTTGTTGCGACGGATGAGTGTCTACATGTGAATTTCAAAATTCAAAATATTCCAGATAATGTTCGTCATCTGTCTTTTGCCGAAAGCAGTTTGTTCGGAAATTTAGTCACCAAAAAATCAACAGTGGTGAGATCCGTACTGTTTTCAGATGGTGCAGCAGCTGCCATCGATGAAGCTTTACTAAATACGTGTCTGTCAAAGTTCAAATGCTTGCGAGTTTTGGATTTACGTGGTTCGACATGCAAGACTTTGCCCCGTGCCATTGCTAAGATGAAACATTTGAGATATTTGGACATTAGCGAAAATATCAACATTAAGAGACTCCCTATCTCTATTTGCAAGCTCCAAAGTTTGCAAGTGTTGTTAATTAAGGGATGCATGGAGCTGGAAGTATTGCCCAAAGGATTAAGACAATTAATCAATATCCGTCATTTGGAGTTTAGCACAAAGCAAACTATTTTGCCTGTGAATGAGATCGCCCAATTGGGGTCGCTTGAATACTTGTACATTGAATCATGCCATAATGTGGAGTCCATCTTTGGAGGTGTGAAATTCCCTTCTCTTAAAACATTGCGCATTCTGAACTGTCAGAGTTTAAAGTCAATGTCGCTGGATGGTAAAAATTTTCCTGAATTAGAAACATTGGTTGTTGCGGACTGCGGTAATTTGGACTTGGAACTGTGGAAGGGTGATCATGAAAAAGAAAGCCCGAAGCTGAAGTTAAAATTTATTGGATTTAACAGTTTATCACAGCTGGTGGCCCTGCCTAAATGGCTTCAGGAAGCTGCCAAATCCTTACAGTGCTTGTATGTTTTAAATTGTGACAATATCGAAACACTTCCAGATTGGTTAACAACTCTGACTGATCTCAAAGCACTTGGTTTAATAAATTGTCCAAATCTGTTATCTCTGGCAGATATTCATCACCACACTGCACTTGAAAGTTTGAGGATTGAAGGTTGTGCTAACTTATATACAAAATATGAACCCAATGTTGGAGAGTTTTGGTCCAAAATATCACACATAAAAAACATTGTGATTGATGAACCAGAAGAACCTAAGAAGAAACAGAGGAAGAGCCCGACATAG 2613 0.3923 MAELFLFSIAESLIAKLASHAFQEAYRVVGLYHDLRNLRKTLSLVKAVLLDAQQKQDHNHQLREWLTHLKTVFSEAEDVLDEFECQTLQNKLVKAHGNTKDKVSHFFSTSNPLLFRYKMTQKIKYINKRLDKVAAHRHKFSLQIIDVDTRVVYRRDMTHSRVSDSDVIGRKNDKEKMIELLMQQNPNDDDTSLSVIPIVGIGGLGKTTLAKFVFNDNRIQECFPLKMWVCVSDEFDIKQLIIKIINSANDENVPPHQQNLSMLDMEQLQNQLKRKLSGQKFLLVLDDVWNEERVKWVELRNLIQVSGAGSKVVVTTRSHSIASMMGTVPSHILEGLSEQDSLSVFVKWAFKEGEEEKHPHLVNIGREIVKKCRGVPLAVRTLGSLLFSKFEDSEWEYVSDNEIWNLPQKKDDILPALKLSYDLLPSYLRQCFALFSLYPKDYLFPSYEIAAIWGSLGLIALPKTSRTLEDVANQYLHELLSRSFLQDFETFGTIFRFRIHDLVHDLALFVATDECLHVNFKIQNIPDNVRHLSFAESSLFGNLVTKKSTVVRSVLFSDGAAAAIDEALLNTCLSKFKCLRVLDLRGSTCKTLPRAIAKMKHLRYLDISENINIKRLPISICKLQSLQVLLIKGCMELEVLPKGLRQLINIRHLEFSTKQTILPVNEIAQLGSLEYLYIESCHNVESIFGGVKFPSLKTLRILNCQSLKSMSLDGKNFPELETLVVADCGNLDLELWKGDHEKESPKLKLKFIGFNSLSQLVALPKWLQEAAKSLQCLYVLNCDNIETLPDWLTTLTDLKALGLINCPNLLSLADIHHHTALESLRIEGCANLYTKYEPNVGEFWSKISHIKNIVIDEPEEPKKKQRKSPT 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01958 870 Gene3D - 10 124 - -
Vian2g01958 870 Gene3D Ribonuclease Inhibitor 742 853 IPR032675 -
Vian2g01958 870 Gene3D Ribonuclease Inhibitor 515 738 IPR032675 -
Vian2g01958 870 PANTHER DISEASE RESISTANCE PROTEIN RP 35 826 IPR044974 GO:0006952
Vian2g01958 870 SUPERFAMILY L domain-like 498 836 - -
Vian2g01958 870 FunFam Probable disease resistance protein At1g61300 150 329 - -
Vian2g01958 870 Gene3D - 420 508 IPR036388 -
Vian2g01958 870 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 434 IPR027417 -
Vian2g01958 870 PRINTS Disease resistance protein signature 275 289 - -
Vian2g01958 870 PRINTS Disease resistance protein signature 372 386 - -
Vian2g01958 870 PRINTS Disease resistance protein signature 195 210 - -
Vian2g01958 870 PRINTS Disease resistance protein signature 597 613 - -
Vian2g01958 870 Pfam NB-ARC domain 173 422 IPR002182 GO:0043531
Vian2g01958 870 Pfam Rx N-terminal domain 11 98 IPR041118 -
Vian2g01958 870 Gene3D - 335 419 IPR042197 -
Vian2g01958 870 Gene3D - 151 330 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01958 Vian-Chr2 39073870 39076482 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01958 178 845 WRKY Transcription Factor Family AT5G45050 21.246 1.26e-10 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01958 - - pvu:PHAVU_001G133600g 1246.11