Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01928 ATGGCACTCATTGGTCCTTCAGGATCTGGGAAATCAACTTTGCTTGCTGCACTTGCTGGGATACTTCCCAACAATGTTAGGATGACCGGAAATGTGGTACTGAATGGGAGTACGAGAAGGACGACAGGCTGCAAAGACGTTTGTTATGTTACTCAAGAAGACTATTTCTTGGGAACTCTAACTGTGAAGGAAACTCTCACATATGCAGCTCGTTTGAGACTTCCTTCACATACGACCAGAAATGAGATTGAGAAGGTGGTAACAAATGTATTGGCTGAAATGGGTCTGGAAGATAGTGCAGAAAGCAGACTTGGGAATTGGCATTTGAGAGGCATAAGTACTGGAGAGAAAAGAAGGCTTAGCATAGGCATTGAAATCTTAACTCAACCTCATGTAATGTTTCTGGATGAACCTACTAGTGGCTTGGATAGTGCAGCCTCTTTCTATGTCATTTCTTCTCTATCTAACATAGCACATGATGGAAGAATAGTCATATGCTCCATTCACCAGCCCAGTGGTGAAATCTTCAACCTTTTCGATGATCTGGTCCTCCTTGCAGCAGGTGAAGCTGTATACTTTGGACAAGCAACTATGGCTGTAAAGTTCTTTGCTGATGCAGGGTTTCCTTGTCCAACCCGAAAGAATCCTCCTGAGCATTTCCTTCGTTGTGTTAGCCCAGAGTTCGATAGTGTCACAGCCTTAATAAAGTCGAAAATTGAAAACGTTTGTATTGCAGCTCATGCAGCAGTTTGTTTCACTATTTTCAGCATTCTTCAGCATGGTTTTGTGGCTCATATGTAA 801 0.427 MALIGPSGSGKSTLLAALAGILPNNVRMTGNVVLNGSTRRTTGCKDVCYVTQEDYFLGTLTVKETLTYAARLRLPSHTTRNEIEKVVTNVLAEMGLEDSAESRLGNWHLRGISTGEKRRLSIGIEILTQPHVMFLDEPTSGLDSAASFYVISSLSNIAHDGRIVICSIHQPSGEIFNLFDDLVLLAAGEAVYFGQATMAVKFFADAGFPCPTRKNPPEHFLRCVSPEFDSVTALIKSKIENVCIAAHAAVCFTIFSILQHGFVAHM 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01928 266 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1 212 IPR003439 GO:0005524
Vian2g01928 266 SMART AAA_5 1 197 IPR003593 GO:0016887
Vian2g01928 266 Pfam ABC transporter 1 140 IPR003439 GO:0005524
Vian2g01928 266 Gene3D - 1 205 IPR027417 -
Vian2g01928 266 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 198 IPR027417 -
Vian2g01928 266 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 1 240 - -
Vian2g01928 266 Pfam ABC-2 type transporter 169 223 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01928 Vian-Chr2 38550695 38554740 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01928 1 172 Calmodulin-binding Proteins AT2G36910 29.609 2.06e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01928 - K05681 gmx:102659519 421.779