Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01922 ATGGGGGATGCTACGATAGATAAGACTCGTGATTTCAACATGGCTTCAAGAAAAGCTGAAGAGGCGGGTCAGTTTGTGATTTCCTTAGCCAAGAGTTCACTTTTGAATGTTACAATGACTTATGCAGCTTGCAGACGCTATAAGGCAACTCAATGGCTAGAAAGCCAAGTGGGTCCTCTTGGTCTACCGAGCCAACCTACAGAGAGAGAACTCATTTCTTGCTTGAGAAATGGTCTGATTCTTTGCAATGCCATTAACAAGATTCATCCAGGAGCAGTGCCTAAAGTTGTGGTTGTGGATAATCAAATGCCTTCACAATCACTTACCTGGGATTCTCAGCCATTGCCCGCCTATCAGTATTTTGTAAATTTACGCAACTTTCTTGTTGCAATGGAGGAATTAAATCTTCCGGCTTTTGAAGCTTCTGATCTTGAAAGGGATACACTGGAGATGGGATCAGCAGCCAAAGTGGTCGATTGCATTTTGGCACTTAAATCGTTTCAGGAGTTGAAGCAGATGAACAATCAGAATGGATACAACAAATGCATAAAATCTCCTTTACCTATGAGACTGCATTCAAGAGCTGCAGCTGCACTACCCTCTGATGCTTCTGGAGGCAAGCTTCACAGGATAATGCAAGCTACCAGAGTTTGCCTGTTGTCATCACTTAAGAGGAAAATCAAAATTGTGGAATTACTTGCCAAGCAACTGGTTGACCGTATGTTAGATGCCAAAGAAAATATTGATGGAAACATCATTGCTTCTCTCTGTAAAGAACACCTGGTAGAGGATCCAATAAAGGTTTTTAATCAGATAATGGCATGTTGTAATGGGGAACAGCCAACTACAAGGTTGCGTGAGGATTTTGTTAAAGAAGAGGGGTTATCACTTCATTCCACATCTACACAATCAGCTGCTTTATCTGCTCCTGACAATTCTAAGCGTTGCCAAGCATGTCCCGGAAAATGCAAGTGCAACCAGGAACATCTTTTAAACATGCAGGAAAAAGAACTTGTGGATCTCAAGGCTTTGAAGTTGAAAATTAAGAAAGAGTTTGAAGAGATGCAGTCACAGTTTCAAGGATTTTTTTATGACATTGGAAGTCAAATACAGGAGATGTCAACTAAAGCTATTGGATATCACAGAGTAGTAGAAGAGAATAGGAAACTATACAATATGGTCCAAGATTTGAAAGGTAATATTCGAGTTTACTGCAGAATCAGGCCATCATTCCGGGCTGAATCAAGGAATATTGTTGATTTCATCGGGGAAGATGGTTCTCTATTCATTTTAGATCCATCAAAAACACTGAAAGATGGAAGGAAACTTTTTCAGTTTAATCGTGTTTTTGGTCCAACAGCTGGCCAAGATGAGGTTTACAAAGATACTCAACCATTGATTAGATCTGTGATGGATGGATACAATGTTTGTATTTTTGCTTATGGTCAAACTGGATCTGGGAAGACTCACACCATGAGTGGTCCATCAAGTGGAACATTTAAGGATATGGGAATCAATTATCTGGCTCTTAAAGATCTGTTTCAAATGTCTAATGAAAGGAATGACATCATAAAAATCCGGAGCTGCAATGATGACGGACTGAGCCTTCCAGATGCTAAATTGCGCCCTGTGAAGTCTACAATTGATGTTATGACCCTCATGAAACTTGGTGAGGTTAATCGCTCTGTCAGTTCGACTGCAATGAACAACAGGAATACATCTGGGAACTCCATTCGCAGTTGCTTGCACTTGGTAGACCTAGCTGGAAGTGAACGAGTAGACAAGTCTGAAGTTACAGGGGATAGACTAAAGGAAGCACAATATATTAACAAATCTCTTTCCTGTTTGGGAGATGTGATCACAGCCCTGGCTCAAAAGAATTCTCACATACCTTACAGGAACAGCAAACTCACTCTTCTTTTGCAAGATTCCTTAGGTGGACATGCAAAAACATTGATGTTTGCTCATGTGAGTCCGGAAGCAGATTCCTTTGGTGAAACAGTGAGTACTTTAAAGTTTGCTCAGAGGGTTTCCACTGTGGAACTGGGGGCAGCCCGTTTGAACAAAGAAAGCAGTGAGGTTATGCAACTTAAAGAACAGGTTGAGAACCTTAAGATTGCATTGGCAACCAAGGACGCTCAGAGAATGTTCCAAAGAAATAAAGAGCCGTACACTCCATCAGAGAAAACTCCATTGCCCTCTCGGAGACTAAGCATTGAGAACTGCCCCGATAAATCTGTGAGTCGAGAGGATAAAAGTGGAGTTAAATCACCACTTTTGTTACCTCGTTCCAGAAGATTAAGTTTGGAAGGTCCAAAATCTATCAAGAAAGATGGTCTACAGTATGAGCCGGTATCTATGCAGAAATATCGCCCAATGCAGGATGTAGAGGCCGTGTCCAAACTAAATGGCCAGTTCAGCAGTGGCAATTCCAAGTCAGAGTTGCATGCCAAAACCCCTCGAAGTCCTACAAGCATTTCCTATCAAACGAGATTGATAAAATTAAATGATGGCATGCAAGTTCCTCCTATTAAACTGCCTCAAACACCTGAACCACCTGTTCGGGATGGAAATGATGCACATGCCTCTAAGGTGATGGGTAGCACAAATGGCAAAGGATCCCAAATAAGAAGATCCTTGAGAACAATTGGGAAACTGATCAATGGCCCTGATAAGAGGAGCCAACAAGTTGAAGTGAAGTCACCCATCAAGGGTACTGGCCATAGAAATAATGTAAAATCACCCATCAGGGGCACTGGCTATACAAATAATGTAAAATCACCAATTTCAGCTGTTGAGAAAACGAAGAGAAGACAATCTCTAACAGGGATTCAAGCACCACTGCCAAACAACTCGCGTAGATCTTCACTTGGAGGAAAGCCAGTAGCAGCATACGACGACAAGGAGAGAAATGCTAGAACTCCTCCTCCAAATCCTCATTCAGACACCAAGACTTCAAAACGGTGGCTGTAG 2973 0.4181 MGDATIDKTRDFNMASRKAEEAGQFVISLAKSSLLNVTMTYAACRRYKATQWLESQVGPLGLPSQPTERELISCLRNGLILCNAINKIHPGAVPKVVVVDNQMPSQSLTWDSQPLPAYQYFVNLRNFLVAMEELNLPAFEASDLERDTLEMGSAAKVVDCILALKSFQELKQMNNQNGYNKCIKSPLPMRLHSRAAAALPSDASGGKLHRIMQATRVCLLSSLKRKIKIVELLAKQLVDRMLDAKENIDGNIIASLCKEHLVEDPIKVFNQIMACCNGEQPTTRLREDFVKEEGLSLHSTSTQSAALSAPDNSKRCQACPGKCKCNQEHLLNMQEKELVDLKALKLKIKKEFEEMQSQFQGFFYDIGSQIQEMSTKAIGYHRVVEENRKLYNMVQDLKGNIRVYCRIRPSFRAESRNIVDFIGEDGSLFILDPSKTLKDGRKLFQFNRVFGPTAGQDEVYKDTQPLIRSVMDGYNVCIFAYGQTGSGKTHTMSGPSSGTFKDMGINYLALKDLFQMSNERNDIIKIRSCNDDGLSLPDAKLRPVKSTIDVMTLMKLGEVNRSVSSTAMNNRNTSGNSIRSCLHLVDLAGSERVDKSEVTGDRLKEAQYINKSLSCLGDVITALAQKNSHIPYRNSKLTLLLQDSLGGHAKTLMFAHVSPEADSFGETVSTLKFAQRVSTVELGAARLNKESSEVMQLKEQVENLKIALATKDAQRMFQRNKEPYTPSEKTPLPSRRLSIENCPDKSVSREDKSGVKSPLLLPRSRRLSLEGPKSIKKDGLQYEPVSMQKYRPMQDVEAVSKLNGQFSSGNSKSELHAKTPRSPTSISYQTRLIKLNDGMQVPPIKLPQTPEPPVRDGNDAHASKVMGSTNGKGSQIRRSLRTIGKLINGPDKRSQQVEVKSPIKGTGHRNNVKSPIRGTGYTNNVKSPISAVEKTKRRQSLTGIQAPLPNNSRRSSLGGKPVAAYDDKERNARTPPPNPHSDTKTSKRWL 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01922 990 ProSiteProfiles Kinesin motor domain profile. 400 680 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian2g01922 990 PANTHER KINESIN-LIKE PROTEIN KLP-3 50 859 IPR027640 GO:0003777|GO:0007018
Vian2g01922 990 Coils Coil 684 714 - -
Vian2g01922 990 MobiDBLite consensus disorder prediction 891 990 - -
Vian2g01922 990 FunFam Kinesin-like protein KIN-14L 33 196 - -
Vian2g01922 990 Gene3D Kinesin motor domain 342 519 IPR036961 -
Vian2g01922 990 ProSiteProfiles Calponin homology (CH) domain profile. 43 169 IPR001715 GO:0005515
Vian2g01922 990 Pfam Calponin homology (CH) domain 44 166 IPR001715 GO:0005515
Vian2g01922 990 MobiDBLite consensus disorder prediction 912 957 - -
Vian2g01922 990 Gene3D Kinesin motor domain 520 722 IPR036961 -
Vian2g01922 990 MobiDBLite consensus disorder prediction 804 824 - -
Vian2g01922 990 SUPERFAMILY Calponin-homology domain, CH-domain 41 176 IPR036872 -
Vian2g01922 990 PRINTS Kinesin heavy chain signature 630 651 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian2g01922 990 PRINTS Kinesin heavy chain signature 581 599 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian2g01922 990 PRINTS Kinesin heavy chain signature 473 494 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian2g01922 990 Pfam Kinesin motor domain 521 679 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian2g01922 990 SMART ch_5 45 167 IPR001715 GO:0005515
Vian2g01922 990 CDD CH_AtKIN14-like 45 166 - -
Vian2g01922 990 Pfam Microtubule binding 386 520 IPR031852 GO:0008017
Vian2g01922 990 Coils Coil 220 240 - -
Vian2g01922 990 Coils Coil 331 358 - -
Vian2g01922 990 SMART kinesin_4 398 688 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian2g01922 990 Gene3D - 37 170 IPR036872 -
Vian2g01922 990 MobiDBLite consensus disorder prediction 720 734 - -
Vian2g01922 990 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 362 679 IPR027417 -
Vian2g01922 990 MobiDBLite consensus disorder prediction 717 783 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01922 Vian-Chr2 38412924 38420126 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01922 330 680 Calmodulin-binding Proteins AT5G65930 37.406 3.53e-58 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01922 K10406 - gmx:100786642 1465.29