Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01892 ATGGCGCCAAAACGAAAACCTTCTTCTCCAATCTCCATCGGTAACTGCGAGGTTACTGTCGAGGCCACTCGTTTCACCTGTAACTCCGACTCAAACGCCGTCGTAATCTCGCTTCCGCGAAGCGGAAAGGTCAAAGTGTCAGCTGCCGTTGTTGAAAACCATGAGAACGCTTCTGAGGATTTTAGATCCGGTGATAAAGAGCATGAGTTCGTGCTGGTTAATCCTAAAGATGCCGATTCTGTTAGTAAATCCTACCTTCAGGAAGTATTAGAAATGTACAGGATAGAGCTACCTGGAATGAATTATGCCGCAAATACTGGAAAACAATCCAAGTTTCTTGAGAGATGTGTGACTAATGGTTCATTGACTGTTTTGTCTAGCAGGAAATATCGAACCCTACTGGTAAAATCCACTCGTGTTGGAAATTCAGGAAAGGTTATAGCCGCAATCACATACCAAATCATCCCTGCAGATACAGAATTTGCAGAGGTCCCACTTGCAGCTGTCAATGCAATCCATCAACGAAAGGGTTTTGGTCATTTATTGGTTCTGGAGCTACGGAAAAGACTTCAAAGTGTTGGCATTCGTTCTATTTTATGCTGGGGAGACAAAGAATCAGAAGGGTTTTGGCTTAAACAGGGTTTTGTAGAAATAGCACAGGTGGATACCAAAGGAAGAGCCCGCAGGTTACCTGTAAAAGCTGATATTCAGAAATCATTATGCTTTCTTGGTGGTTCAACTCTCATGGTTTGCCACGTAATGAAAGAATGCTTAGCCGATGAGGATAACACTACGAAGTGTCTCCCTTCACAGTTTCATCAGAATTCCTTTACACCTGCCATTGCTGAAGATGAGCAGCTGAAGATTTCAGGATCTGACAGTCGTAACCCCAAGAAATTCTGTAGTAGTATTGCTCCATTTGCCCAAGTAAACGATGATAGACAGGCCACTGGTTCGGAAAGTTCACAGCATGGAGTTGGTGCTAATGTGAATTATTGTTCTCAATCTACAAAAGGTGCAAAGAGGACCTGGGAAGCCTCTTTATCCTCATTGAAGTCAAAAAGAGTGAAAGGGAGCCAGCTGGTTGACAATCAATCAGGTTCTAGCTGCGGTTTTATCTTAGAGACTGATGAGTCCAATCCCTGTTTTGTAGAGGCCCTCTACGATCCTTCGATTAGAGATGGTTCTGAAAAATGTGTCGATAATTATTTACATTTAGAAGCTCCTATCAACATGGAACCTCCGTCTACTAAACAATGCTTTAGAATTATGTTGATGAATATCGCTGATGATGCTAAGAAAACACAGCTTACAAAGGTGATTGAAGACCTTGGTGGAACTGTATCCACTTGTGGAAGTATGACCACACACGTTGTCACAGGAAAAGTGATTAGTAGAGTGGAGAAAGTAAAAGAAACATCAACAACAATCTTTGTGACGGGCGAAGAAGACACGGAAGAAGCAATGGTAGCCGCAAAGAAAGGGATCCGAACTTTCAGTTGCGATTGGTTTATGAACTGTGTCATGAGACAAGAACTTGACTTGGAAGCCCCCCAGTTTGCTGAGACCTTATAA 1575 0.4273 MAPKRKPSSPISIGNCEVTVEATRFTCNSDSNAVVISLPRSGKVKVSAAVVENHENASEDFRSGDKEHEFVLVNPKDADSVSKSYLQEVLEMYRIELPGMNYAANTGKQSKFLERCVTNGSLTVLSSRKYRTLLVKSTRVGNSGKVIAAITYQIIPADTEFAEVPLAAVNAIHQRKGFGHLLVLELRKRLQSVGIRSILCWGDKESEGFWLKQGFVEIAQVDTKGRARRLPVKADIQKSLCFLGGSTLMVCHVMKECLADEDNTTKCLPSQFHQNSFTPAIAEDEQLKISGSDSRNPKKFCSSIAPFAQVNDDRQATGSESSQHGVGANVNYCSQSTKGAKRTWEASLSSLKSKRVKGSQLVDNQSGSSCGFILETDESNPCFVEALYDPSIRDGSEKCVDNYLHLEAPINMEPPSTKQCFRIMLMNIADDAKKTQLTKVIEDLGGTVSTCGSMTTHVVTGKVISRVEKVKETSTTIFVTGEEDTEEAMVAAKKGIRTFSCDWFMNCVMRQELDLEAPQFAETL 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01892 524 PANTHER PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN 65 245 - -
Vian2g01892 524 Gene3D BRCT domain 424 521 IPR036420 -
Vian2g01892 524 Pfam Acetyltransferase (GNAT) family 142 215 IPR000182 GO:0016747
Vian2g01892 524 ProSiteProfiles BRCT domain profile. 423 513 IPR001357 -
Vian2g01892 524 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 129 222 IPR016181 -
Vian2g01892 524 CDD NAT_SF 142 201 - -
Vian2g01892 524 Gene3D - 66 237 - -
Vian2g01892 524 Pfam BRCA1 C Terminus (BRCT) domain 429 508 IPR001357 -
Vian2g01892 524 SUPERFAMILY BRCT domain 422 514 IPR036420 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vian2g01892 BRCT 4.5e-06 CL0459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01892 - - gmx:100806087 723.391
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01892 2 37923283 37929119 Vian2g01892 2 37923283 37929119 ECH