Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01869 ATGAAGGTTGAAATTGAAGGCAGCCAGAGTGACTCTGCAGAATCTCAGGGAGTGTCTGGAACAGATGAATCTGTTTCCGGCCAATCAGAAAATAGAAGACTGGAATCCAAGAAGAAACTGAAGAAAGTGAGGTCAATAAGGCTTGTAAGATTGCCAAGCAAGAGATCATCCGTTAGAGGGAGACCCCAATATGATCATCTCTCCATTCTCTCATCAGTTAGCACAGAAAATTTAGAGGGGCTAACACCACTTGGTATGGCAGATGCATCACCCCATTACATGAAGGGTACCAGTAGTTCTCATGCAAAGGACAGTGTTCAGAATACAGAAAGACTATTGTTCACAAAGAAGACTTTGGGAAGAATGACTACTTTGAAACTGAAGAGGAGTCTGACCAGAAAAGTATCTGGTAGGACCGAACCAAAGAGGAAAGTGAAGTCGTCTAGATCAATCATGCTTGTAACTGTCAGGGGCCAAAAGTCATCTGAATCTAGTTATGGCAGTGGTGACCAGAATTGGATAAGTGCAAGTGATGCTGCTGATAACAAAACCCAGAGAGTCATTGCCCGAAGATTAAGCTTGAAGCCTGTGAGGATCTTAGCAAAGATTCCCACTTTCAAATCAAAGAATTCTTCCATGGAGAGTGGCCAATCCCCAGACACAAGCTTGCTTAGAGCCACTTGTTCTTCTGCTCTGAAGGATTCCCATTTTCCTGATCACATTGGCGTCCTTCAAGAGGAAAGTGACTCTCAAGGAGTATCAGCTGTTGCCAAGGTTTGTCCATATTCTTACTGCTCACTTCATGGTCACCGCCATGGGAATCTGCCTCCACTGAAGCGCCTTGTGTCAATGAGGAGGCGCAAGTTGAAGAGCCAGAAGCCAACGAAAATGGATAATCAACCTGTTACTAGATCAAATCAGTTTGGTAATGCAAAGAAAGGTACTCGTAAAACTCAAACTGTCCACAGTGAAGGTGGCAAATCTCATTTTCAGAACAAGAAAAAGCTGGCAAGGGACTCATGTATTAGGCCTCATGATACTCCAGAATCCACAGTTACTGAAAGTGTAGAACCAGTATCAACCGATGGAGTTCAGTTTTCTGCTCCTGATATTGAGATGTTGGAGGGAGAAGTAACCAACAGAGGCAAAAATATGGAGCCTGACCATGAAGTACTTGAGGTGAGTTCTGTACCGAAAGAGTCTACACATGCTAGCACTACTGATATGGCATGTGGAATGCAGGAAAGAGATAAAAAGCACATCAACATGTGGCACTTGGTGTACAAACATACTGTACTAAGTAACACAGGGAAATGTGAAAACAAGCCGCCCTTTGATGGAGGGAACAAGGAAGGAAGAGAGCAAGGTTTCCTTACAACTAATGAAGTAAACAACTCTAATTTTCGAGATGATTGTGATACAGACCAGGATATGGATGATGAAAATAAGAATGTAATTGAGCTGGTGCAGAAAGCGTTTGATGAAATTCTTCTCCCAGAACCTGAAGAACTCTTTTCTGATGATAATTCCAAATCTGTAGGCGCTGATTCAGATGAGGTACTCTTAGAAAAAAACAATGGCCAGACAGAATGGAAAACCTCAGAATCCACAGAATCTCCAATAGCACAGAGGATGGAGACCAAATCTGATCAAAGAGCACCGAAAAGCTGGAGCAATCTGAAAAAGTTAATCCTCTGGAAGAGGTTTGTAAAAGCATTGGAGAAGGTAAAAAATATCCATCCTCAAAGGCCAAGACCTTTTCCTTCTGATGCTAACTTTGAAATGGAAAAAGTTTTTCTCAAGCACCAAACAGCAGAAGAGAAAAAGCAAGCTGAGGAATGGATGCTTGACTATGCACTTCAAAAGGTTATTTCTAAACTTGCACCTGCTCAAAGACGAAGAGTGACACTTTTAGTAGAAGCTTTTGAAACAGTTCAGCCATTTCAAGATGTTGAAAATAGTACACGGCTTTCTGCAACAACGGAGCATCAATCAAATCTAATTCAATCCCTTGAGAATTTCTCAAATCATAGCAAGGGAGAAGCATCCCTTTCTCATAAGAGTACCATGGAACTGGCTGTTAGTACTGGTGATGATCCAATTATAGAAATGCACAGTCCTACTATGCTTAAAGAAAGATGTGTTGACTATACTGAGACTGAGGCAGTCGATAATATGCCAGTATTTAGAGATATTGAAGAAGACTTGAATGGAAAGCAATGTTTAGCCAGAAGTTATGATAATGAGAAGAAATTATCAAGTCACAATGATAATATTTTTCTTGGAGAGATCAAAGATACCAGATCAAGTTCCTTAAATAGGCCAACTGAATTTACAAGCAGCCATGTGGAGGATTCAACCAATGCAGTAGTCAATGGTGTTTCAGAAGACTTGCTATCCAGTTTGAATACAGAAAATCAACATATCAAATCTGAGTCACCTGGAAGAGATGTCGAAACCAAGAATCTGATTGGTGATGATGGGGAAAAGCTTTCCATGTCTAAAAGTTTAATAGTAGAAGGTCTAGTTAGATCACTCAGATCTAACTTGATTGGTTCAGGAGCACCTGAGAAGCTATTAGATGAATCATCAGCTGATGGAAAAGAAGGAACTGAAAAATTTAAGTTGGAAACTGAGACTGTTGAAGAGTTCCCTACAAAGGAACAATCTAAAGCTCCTAAGAGTGCTGCTGTAGAACTTGAGACCCCTGTGGAGAAACAGAACAACACAGGGTTGTGGTTCTTGGTGTACAAACACATGGTAACAAATATGGCTGAAAGCAATTCCAAGTCACTGATTGATGGTGAAGATGGGAAAGAGTCAGCATTTGATGGAAGCAGAACACGAGGATCTTCCATCTCTTACGAAGGCACAACTGTGAGTAATCAAGAGATGCAATTCAAGGACCATGCTGCAGCTGATCCAGAAGTTGCACTCCAACAGATAGAAGCCATCAAGATGGTAGAAGAAGCGATTGATTCAATTCTTCCAGATGATCAGGATGACTTAGCAGACAAGGAGTCACTCACTGGCAGCACAATATCAGACAACTTCAAACAATCTGACAGAACTGAAAGAGAGTACAGTGAAGACCTGAACCAAAAAGAAGAAAAGATGGAATCTGGGAATGAAATACTCCAGGAACAGCAAAAAGAATCAGCAGCACTAAAGGAACAATGCAAAACAAACCAGCCATTGTCTAGAAGCTGGAGCAATCTTAAAAAAGTGATTCTTCTGAGGAGATTCATCAAGTCATTGGAAAAAGTAAGGAAATTCAATCCAAGAGGCCCCAGATATCTACCTCTAGAGGCTGATTCAGAAGCTGAAAAAGTTAACTTAAGGCATCAAGACATGGAAGAAAGAAAAGGAACTGAAGAATGGATGCTTGATTATGCACTTCGACAGGTTGTTTCCAAATTAACCCCGGCTAGGAAAAGAAAAGTGGAGCTGCTGGTGGAAGCTTTTGAAACAGTCATGCCAACCATAACAAAATGA 3495 0.4103 MKVEIEGSQSDSAESQGVSGTDESVSGQSENRRLESKKKLKKVRSIRLVRLPSKRSSVRGRPQYDHLSILSSVSTENLEGLTPLGMADASPHYMKGTSSSHAKDSVQNTERLLFTKKTLGRMTTLKLKRSLTRKVSGRTEPKRKVKSSRSIMLVTVRGQKSSESSYGSGDQNWISASDAADNKTQRVIARRLSLKPVRILAKIPTFKSKNSSMESGQSPDTSLLRATCSSALKDSHFPDHIGVLQEESDSQGVSAVAKVCPYSYCSLHGHRHGNLPPLKRLVSMRRRKLKSQKPTKMDNQPVTRSNQFGNAKKGTRKTQTVHSEGGKSHFQNKKKLARDSCIRPHDTPESTVTESVEPVSTDGVQFSAPDIEMLEGEVTNRGKNMEPDHEVLEVSSVPKESTHASTTDMACGMQERDKKHINMWHLVYKHTVLSNTGKCENKPPFDGGNKEGREQGFLTTNEVNNSNFRDDCDTDQDMDDENKNVIELVQKAFDEILLPEPEELFSDDNSKSVGADSDEVLLEKNNGQTEWKTSESTESPIAQRMETKSDQRAPKSWSNLKKLILWKRFVKALEKVKNIHPQRPRPFPSDANFEMEKVFLKHQTAEEKKQAEEWMLDYALQKVISKLAPAQRRRVTLLVEAFETVQPFQDVENSTRLSATTEHQSNLIQSLENFSNHSKGEASLSHKSTMELAVSTGDDPIIEMHSPTMLKERCVDYTETEAVDNMPVFRDIEEDLNGKQCLARSYDNEKKLSSHNDNIFLGEIKDTRSSSLNRPTEFTSSHVEDSTNAVVNGVSEDLLSSLNTENQHIKSESPGRDVETKNLIGDDGEKLSMSKSLIVEGLVRSLRSNLIGSGAPEKLLDESSADGKEGTEKFKLETETVEEFPTKEQSKAPKSAAVELETPVEKQNNTGLWFLVYKHMVTNMAESNSKSLIDGEDGKESAFDGSRTRGSSISYEGTTVSNQEMQFKDHAAADPEVALQQIEAIKMVEEAIDSILPDDQDDLADKESLTGSTISDNFKQSDRTEREYSEDLNQKEEKMESGNEILQEQQKESAALKEQCKTNQPLSRSWSNLKKVILLRRFIKSLEKVRKFNPRGPRYLPLEADSEAEKVNLRHQDMEERKGTEEWMLDYALRQVVSKLTPARKRKVELLVEAFETVMPTITK 1164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01869 1164 MobiDBLite consensus disorder prediction 130 149 - -
Vian2g01869 1164 MobiDBLite consensus disorder prediction 854 873 - -
Vian2g01869 1164 MobiDBLite consensus disorder prediction 133 147 - -
Vian2g01869 1164 MobiDBLite consensus disorder prediction 881 900 - -
Vian2g01869 1164 MobiDBLite consensus disorder prediction 930 952 - -
Vian2g01869 1164 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 715 1160 IPR044681 GO:0005516
Vian2g01869 1164 MobiDBLite consensus disorder prediction 524 553 - -
Vian2g01869 1164 MobiDBLite consensus disorder prediction 317 336 - -
Vian2g01869 1164 MobiDBLite consensus disorder prediction 998 1062 - -
Vian2g01869 1164 MobiDBLite consensus disorder prediction 1 45 - -
Vian2g01869 1164 MobiDBLite consensus disorder prediction 295 316 - -
Vian2g01869 1164 SMART CaM_binding_2 533 647 IPR012417 GO:0005516
Vian2g01869 1164 SMART CaM_binding_2 1046 1160 IPR012417 GO:0005516
Vian2g01869 1164 MobiDBLite consensus disorder prediction 1019 1045 - -
Vian2g01869 1164 MobiDBLite consensus disorder prediction 8 27 - -
Vian2g01869 1164 MobiDBLite consensus disorder prediction 289 336 - -
Vian2g01869 1164 Coils Coil 1029 1059 - -
Vian2g01869 1164 Pfam Plant calmodulin-binding domain 1058 1160 IPR012417 GO:0005516
Vian2g01869 1164 Pfam Plant calmodulin-binding domain 543 646 IPR012417 GO:0005516
Vian2g01869 1164 MobiDBLite consensus disorder prediction 1046 1062 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01869 Vian-Chr2 37590180 37593784 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01869 486 648 Calmodulin-binding Proteins AT5G04020 36.111 1.05e-17 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01869 - - gmx:100804484 1610.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01869 2 37590180 37593784 Vian2g01869 2 37590180 37593784 ECH