Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01862 ATGTCAGAATCAAACGCAATTGCAAATGGATTGGCTGGTGCAGGTGGTGGAATCATTGCTCAAATCATCACTTATCCTCTTCAAACGGTAAACACGCGTCAGCAAACTGAGAGAACACTCAAGAGGAACAAGCAAAGTTTGCCCTCTAACACAACCACTGCTCCTGGCACTCTTCTTCAGATCTTTCAGGTCATTAGAACTGAGGGTTGGGGTGGACTCTACAGTGGCCTCAAGCCTTCTCTTCTTGGAACTGCTGCTTCTCAGGGCATTTACTACTATTTCTATCAAGTTTTCAAGAACAAGGCAGTGGCGATTGCAGCTGCACGGAAAGTGAAAGGGCGTGGAGATGGTACTGTTGGGATGTTTGGTTGGCTTGTTGTGGCTGCAATTGCTGGGTCCTTGAATGTGTTGCTGACAAATCCAATATGGGTTTTAGTGACTCGGATGCAGACTCATACTCAAGCAGAAAGGAAAATTATGGAGGAAAAGAAAGAAGCTTTAAGGAAGGCTGCTTCTGAAAGCGCCATAGCAGATTCCACATTGCAAGATAAATTGGATGAACTGAATTCTATAAAACCTCGACCATTTGGAACTATACATGCAGCTAAAGAAGTCTACAATGAAGCGGGTACAGTAGGATTTTGGAAGGGTGTCTTCCCTGCCCTTATTATGGTATGTAATCCATCAATTCAGTTTATGATTTATGAAAGCTCATTAAAGCATCTAAGGGCAAAACGTGCCGCTAAGAAGCAAGGGAATACAAGTATATCCGCTTTGGAGGTCTTTTTGGTGGGAGCAATAGCTAAGCTTGGAGCCACTGTGACAACATATCCATTACTAGTTGTGAAGTCAAGGCTTCAAGCAAAACAGGAGATTGGTGGAAATAACTCCTTAAGATACTCAGGTACTTTTGATGCTGTACTTAAAATGATCCGTTATGAAGGAATAACAGGCTTCTATAAGGGGATGAGCACAAAGATAGTGCAGAGTGTTTTTGCAGCCTCTGTTCTATTTATGATCAAAGAGGAGCTTGTTAAGGCTTTTATAGTTCTAACCAATAAGAGCAAAAAAGTTTCATCAAATTTGAGTAGTTGA 1095 0.4192 MSESNAIANGLAGAGGGIIAQIITYPLQTVNTRQQTERTLKRNKQSLPSNTTTAPGTLLQIFQVIRTEGWGGLYSGLKPSLLGTAASQGIYYYFYQVFKNKAVAIAAARKVKGRGDGTVGMFGWLVVAAIAGSLNVLLTNPIWVLVTRMQTHTQAERKIMEEKKEALRKAASESAIADSTLQDKLDELNSIKPRPFGTIHAAKEVYNEAGTVGFWKGVFPALIMVCNPSIQFMIYESSLKHLRAKRAAKKQGNTSISALEVFLVGAIAKLGATVTTYPLLVVKSRLQAKQEIGGNNSLRYSGTFDAVLKMIRYEGITGFYKGMSTKIVQSVFAASVLFMIKEELVKAFIVLTNKSKKVSSNLSS 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01862 364 SUPERFAMILY Mitochondrial carrier 5 343 IPR023395 -
Vian2g01862 364 Gene3D Mitochondrial carrier domain 1 171 IPR023395 -
Vian2g01862 364 Gene3D Mitochondrial carrier domain 172 363 IPR023395 -
Vian2g01862 364 ProSiteProfiles Solute carrier (Solcar) repeat profile. 256 347 IPR018108 -
Vian2g01862 364 ProSiteProfiles Solute carrier (Solcar) repeat profile. 119 241 IPR018108 -
Vian2g01862 364 ProSiteProfiles Solute carrier (Solcar) repeat profile. 4 101 IPR018108 -
Vian2g01862 364 Pfam Mitochondrial carrier protein 4 100 IPR018108 -
Vian2g01862 364 Pfam Mitochondrial carrier protein 256 348 IPR018108 -
Vian2g01862 364 Pfam Mitochondrial carrier protein 119 243 IPR018108 -
Vian2g01862 364 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 5 353 IPR044712 GO:0006862|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01862 Vian-Chr2 37436318 37440571 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01862 64 348 Chloroplast and Mitochondria Gene Families AT1G25380 26.804 1.82e-26 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01862 K13354 - gmx:100775304 596.66