Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01844 ATGGCCCACAACCGAAGAGACTCCCAATCTTTCATGGATGATTTCGATGGGGATGATAACGAAGAACATAACACACAATCTGCTGATTACAGGAGTGAGCACAGTAATCAATGTGACAGTGACGAGGAGGGGCATCGTAAAACGCACCCTGAATCTTCTTTCATTTCTCAGCAGTGGCCTCAAACTTATAGAGATGCCATTGATTCTTACACAATATCTGTGGCTCCAAATATTGAATCAATAATACGAGCACCAAGTGTTATTTATTCAAGCTTTATCGGTGGTGGTTCAAAGAGTATGTTGGAACATGATGAAAGGACTTCTTTTCTATCTGGTGAGGAAATCATTCAAGCAGGGATATCAAGAAGACAATCAACATGGTGGGAAAAAGCTTCAATTCAAATGCAAATTCCTGAAGAGTTACCAATTGGTTATGGATGCAGCCTCAGTCAAACAATATTTAACGGGATTAATGTGATGGCTGGAGTTGGACTTCTTTCTACACCATATACAGTGAAACAAGCTGGGTGGGCAAGCATGCTTGTGATGCTTTTCTTTGCAATTGTATGTTGTTATACAGCAGATCTTATGAAACACTGCTTTGAAAGTGAAGAAGGTATCGTTAGCTACCCTGATATAGGAGAAGCTGCATTTGGAAGATATGGTCGCCTTATTGTATCAATCATTTTGTACGTTGAGTTATATTCATATTGTGTAGAGTTTATCATCTTGGAAGGAGATAACCTCTCTGGGTTGTTCCCCGGAACATCCTTAGATTGGGGGGGTTTCCACTTGGACACCAAACACTTGTTTGGAATTTTAACTGCGCTTATCATTCTTCCGACTGTTTGGTTAAAGGATCTACGCATACTCTCGTATCTCTCAGCTGGAGGGGTTGTGTCTACTACTTTGGTTATTTTGTGTGTTTTTCTTGTTGGGACAAGAGATGATGTTGGATTCCACCACAGTGGTTCATTGGTGAATTGGAGTGGCATTCCTTTTGCTGTTGGTATCTACGGGTTTTGCTTTGCAGGACATTCAGTTTTTCCAAACATTTATCAGTCGATGGCAGACAAAAGAGAATTTACCAAGGCTGTCATTGTAAGTTTTCTTATATGCACAGTTGTGTATGGAAGCTCAGCTGTGATGGGATTTCTAATGTTTGGTGAAGGGACTTTGTCTCAGATAACATTGAATTTACCACGTAATGCATTGGCTTCCAAAGTTGCTTTGTGGACAATAGCAGTGGTGTTGCCATCTTTATGCTTTTTGAAAATTGTGGGAAAAAACGCTACATGTACACAGGTTGTTCTTAGCGTCATAATTGCTGTGCTTGGAATTGCTGCTGCTTTGATCGGAACATACTCATCTGTATTCAAAATTATGCAAAAATAA 1395 0.4 MAHNRRDSQSFMDDFDGDDNEEHNTQSADYRSEHSNQCDSDEEGHRKTHPESSFISQQWPQTYRDAIDSYTISVAPNIESIIRAPSVIYSSFIGGGSKSMLEHDERTSFLSGEEIIQAGISRRQSTWWEKASIQMQIPEELPIGYGCSLSQTIFNGINVMAGVGLLSTPYTVKQAGWASMLVMLFFAIVCCYTADLMKHCFESEEGIVSYPDIGEAAFGRYGRLIVSIILYVELYSYCVEFIILEGDNLSGLFPGTSLDWGGFHLDTKHLFGILTALIILPTVWLKDLRILSYLSAGGVVSTTLVILCVFLVGTRDDVGFHHSGSLVNWSGIPFAVGIYGFCFAGHSVFPNIYQSMADKREFTKAVIVSFLICTVVYGSSAVMGFLMFGEGTLSQITLNLPRNALASKVALWTIAVVLPSLCFLKIVGKNATCTQVVLSVIIAVLGIAAALIGTYSSVFKIMQK 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01844 464 MobiDBLite consensus disorder prediction 1 58 - -
Vian2g01844 464 MobiDBLite consensus disorder prediction 21 50 - -
Vian2g01844 464 PANTHER OS05G0424000 PROTEIN-RELATED 156 416 - -
Vian2g01844 464 Pfam Transmembrane amino acid transporter protein 148 404 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01844 Vian-Chr2 37137062 37142055 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01844 54 416 Amino Acid or Auxin Permease AAAP Family AT2G41190 63.014 2.53e-167 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01844 K15015 - gmx:100790344 563.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01844 2 37137062 37142055 Vian2g01844 2 37137062 37142055 ECH