Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01811 ATGAGGGAAGAGGATTCCAATTGGTTTTCGCGATGGGAAGAGGAGCTTCCTCCGCCAGAGGAACTCATGCCCCTATCCCAAACCCTAATCACGCCCGATCTAGCCATGGCTTTCGACATCAGAAACCCCCACACCTCCACCAACCCCAACACCGCCCAACAGCATCAACACCAACAGCAGCCACCGCAACAACAACAACAACAGCAACAACCTTCCAACCCTTCATCGCTCCCCAACCCCCAGCAACCCACCTCCAATGACTTTGCCGACTCCGGCGAGCTCGGCTCCGGCACCGCCGGCGAGGAGCCCGCTCGAACCCTCAAGCGCCCCCGCCTTGTGTGGACCCCGCAGCTCCATAAGCGCTTCGTCGACGCCGTCGCGCACCTCGGCATAAAAAACGCCGTTCCCAAGACCATAATGCAGCTCATGAGCGTCGATGGTTTGACCCGAGAAAACGTGGCCAGCCACTTGCAGAAGTACCGTCTCTATCTCAAACGCATGCAGGGGATTTCCGCCGCCGGACCCGGTGGACCCGGAGGCGGTGCCTCCGGCGCCGTCGCGGACCCCGCCACTGACCACCTCTTCGCCAGCTCCCCGGTGCCGGCGCATTTCCTGCACCCCGCGACGAGGCCTAATTCGGATCATTTCCTTCCGTTTGTGCCGGTGCCGGCGCTCCACCACCACCAGCAGCAACAGCAGCAGCTGGCCGCGGCGGCCCAGTACCATAGGCAGGTGAGCCATTTCGGGTCGCCGCCGAACGGGCACTTCGAGAACCCCTTCATTTCTAGGCCGAATCTTCAGAGGATGGGTGGGGGTGGAGGTGGAGGTGGTCCTGTGCATAACCACCACCCTGTGAGTGGCTATGTGGAGGATATGGAATCTGCTAATGCTGCCTCAGGAGGTAGAAAGGTTCTTACTCTGTTTCCAACTGGGGATGATTGA 942 0.6051 MREEDSNWFSRWEEELPPPEELMPLSQTLITPDLAMAFDIRNPHTSTNPNTAQQHQHQQQPPQQQQQQQQPSNPSSLPNPQQPTSNDFADSGELGSGTAGEEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISAAGPGGPGGGASGAVADPATDHLFASSPVPAHFLHPATRPNSDHFLPFVPVPALHHHQQQQQQLAAAAQYHRQVSHFGSPPNGHFENPFISRPNLQRMGGGGGGGGPVHNHHPVSGYVEDMESANAASGGRKVLTLFPTGDD 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01811 313 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 3 270 IPR044841 GO:0003700|GO:0006355
Vian2g01811 313 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 114 165 IPR017930 -
Vian2g01811 313 MobiDBLite consensus disorder prediction 41 92 - -
Vian2g01811 313 FunFam Two-component response regulator 105 168 - -
Vian2g01811 313 Gene3D - 106 168 - -
Vian2g01811 313 SUPERFAMILY Homeodomain-like 106 166 IPR009057 -
Vian2g01811 313 Pfam Myb-like DNA-binding domain 113 161 IPR001005 -
Vian2g01811 313 MobiDBLite consensus disorder prediction 1 18 - -
Vian2g01811 313 NCBIfam myb-like DNA-binding domain, SHAQKYF class 110 162 IPR006447 GO:0003677
Vian2g01811 313 MobiDBLite consensus disorder prediction 1 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01811 Vian-Chr2 36496008 36496949 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01811 1 313 G2-like Transcription Factor Family AT3G10760 57.865 8.69e-100 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Vian2g01811 Myb_DNA-binding 2.4e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01811 - - gmx:100797237 468.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01811 2 36496008 36496949 Vian2g01811 2 36496008 36496949 ECH