Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01809 ATGACACCTTCCGTCGTGGTCGTTGAAAGCAACAGAACGAGCGAAACCCCAACATTTCTTAAAACCCAAACTTTCCGTCTTCCTTCTCGGAAACCCTCACCCATGACCGAATCAATGCACGCCGTGGAACCGTCGCCGGAGGCGGCGGTGCTGCCGGTCTCCGATCCCTTGTTCGACGAGTTCTCCACCGAGTTTGGATCCCTCCCCCTCCTGTCCATAGACTCGCTCTTCAACTCCGACACGCTTCCCTTCACCTCAGATCTCGAATTCGGCATGGATTTTGATGACAACAATGGAGAGTTCGAAATCACCTTCGACGATCTTGACGAAATCTGCATTCCCTCCGACGTCGAGGATTTCCTTCTCCCTGACGCATGTGACCCCAATAATACCTCCGTTTTGCCGCCGATTGACGAGTCTTCCGCGAAGAATTCCGATTCTCCGCGTTCAGACACGTCTGTAGTTTCTGGAGATCGGAGCTTCGGCGTTTCAAGGTTTTTCAATTCGCAAGCGTCGGATTCTGTTTCTGAGGGTAATTCGTGCAAAGAGGGTTCGCATGACGCGGCTGATGTTAGGGTTTCGAATATTTCATCGCCGGAGTCTGAATTTTGCGACCGGGAGGAGTCTTCTGGTGGACCGGTTTCCTCTCAGGGTTCAGGGAACGGTGGATCGGGTGTATGTGAGGCTGTGAACTCGCCCTCGCCTGATTCTGGATCTTTCGAGAGGAACATAACATCGTCTCATGAGCATGCTGTTATGGACAAGGGTGTGAAATTGGAGGAAATTTCTGGGTGTGATCTGAAGAGGAAGAAAGTGAGTTGTGAAGGAAGTGCTACCAAGCACAGAAGGTTCTCTTCCTCCTCGGTGGACACTAAGACAGAGAAACAGACTCCATCTGATGTGAATGCAATTGATGACGATGATGAGAAAAGGAAGGCAAGGTTGATGAGGAATAGGGAAAGTGCACAGCTTTCTAGGCAGAGGAAGAAGCATTACGTGGAGGAGCTTGAGGAGAAAGTGAGATCAATGAATTCCATCATTGCTGATCTGAGTAGCAAGATTTCATACATGGTGGCTGAGAATGCTACACTTAGACAGCAAGTGGGTGCTGGTGTGATGTGTGCTCCTCCACCACCTGCTCCTGGGATTTACCCTCATCCTCCAATGGCACACATGACTTATCCTTGGATGCCTTGTGCTCCGTATGTTGTCAAGCCTCAGGGATCTCAGGTTCCTTTGGTACCCATTCCCAGGTTGAAGCCTCAGCAACCCACTTCAGCACCCAAAGGTAAAAAGTCCGATAGTAAGAAGAGTGAGGGGAAAACTAAGAAGGTTGCTAGTATTAGTTTCTTGGGTTTGTTTTTCTTTATCATGCTTTTTGGTGGGCTTGTTCCGCTTGTGGATTTTAAGTTTGGCGGTTTAGTGGACAATGTTCCTGATACTGGTATGTCTAGCTTTGTTAGTGATAGGGTATATGGTCAAGGTGGGGGTAAGGTTTGGTCTGTGAACGGTCCTAGGAATGGGTCTGAAAGAGATGAAGAAGTACGGTTTTCTAATGATAGGTTTAGTGTTAAAGACAAAATGAATCATGAGAGAGGCCGGCATTTAGGAGAAGAAAGGGGTGAACGGGAGGGCCCTGATAATTTTGGTCGCCAGGGAAATGCCAGCGAGCCTCTTGTTGCTTCTTTGTATGTTCCTAGGAATGATAAGATGGTGAAGATTGATGGAAACTTAATTATCCATTCCATAATGGCTAGTGAAAAAGCTATGGCATCTCAAACTGCCGATGCAAAGGAGAAGAGAGAAACAGGTTTGGCCATTCCTAAGGATTGGGATTCTGCATTGGCTATACCTGAAGTTGGAAGACATCCAAATGTATATAGGGTTCCTGCTGAACAGAGGAAGGCTCTTGCCTCTGGTTCAACCAAAGCTTTAAAGGACCATATGAAGTCCTCTGCAACTGATGGTAAAATGCAACAGTGGTTCCGTGAAGGTCTTGCAGGGCCAATGTTAAGTTCTGGCATGTGCACTGAAGTTTTCCAGTTTGATGTTTCTCCAAGTCCTGGAGCTATAGTTCCTGCAACATCAGTATCTAATGTGTCTACCGAAAAGCGTCAGAATGCTACCTCGGTGAAAAAGACCAGGAATAGAAGAACCCTTCGTGGGCTTCCAGATTCTCTTACTGGATCGAGTCTGAACATAACTGAAGAGCATGTAAAAAACTTGGATAAAAACCACCTCCATGGTAATGAATCTTCCATGGTGGTTTCAGTTCTTGTTGATCCTAAAGAGGTTGGCGATGGTGATGTCGATGGCATGATGAGACCGAAGTCACTCTCTCGGATCTTCGTGGTTGTGCTAATTGATAGTGTCAAGTATGTCACTTACTCTTGCGGTCTGCCTCGTGCTTCTCCCCTTTGGTGA 2424 0.4728 MTPSVVVVESNRTSETPTFLKTQTFRLPSRKPSPMTESMHAVEPSPEAAVLPVSDPLFDEFSTEFGSLPLLSIDSLFNSDTLPFTSDLEFGMDFDDNNGEFEITFDDLDEICIPSDVEDFLLPDACDPNNTSVLPPIDESSAKNSDSPRSDTSVVSGDRSFGVSRFFNSQASDSVSEGNSCKEGSHDAADVRVSNISSPESEFCDREESSGGPVSSQGSGNGGSGVCEAVNSPSPDSGSFERNITSSHEHAVMDKGVKLEEISGCDLKRKKVSCEGSATKHRRFSSSSVDTKTEKQTPSDVNAIDDDDEKRKARLMRNRESAQLSRQRKKHYVEELEEKVRSMNSIIADLSSKISYMVAENATLRQQVGAGVMCAPPPPAPGIYPHPPMAHMTYPWMPCAPYVVKPQGSQVPLVPIPRLKPQQPTSAPKGKKSDSKKSEGKTKKVASISFLGLFFFIMLFGGLVPLVDFKFGGLVDNVPDTGMSSFVSDRVYGQGGGKVWSVNGPRNGSERDEEVRFSNDRFSVKDKMNHERGRHLGEERGEREGPDNFGRQGNASEPLVASLYVPRNDKMVKIDGNLIIHSIMASEKAMASQTADAKEKRETGLAIPKDWDSALAIPEVGRHPNVYRVPAEQRKALASGSTKALKDHMKSSATDGKMQQWFREGLAGPMLSSGMCTEVFQFDVSPSPGAIVPATSVSNVSTEKRQNATSVKKTRNRRTLRGLPDSLTGSSLNITEEHVKNLDKNHLHGNESSMVVSVLVDPKEVGDGDVDGMMRPKSLSRIFVVVLIDSVKYVTYSCGLPRASPLW 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01809 807 Pfam bZIP transcription factor 310 368 IPR004827 GO:0003700|GO:0006355
Vian2g01809 807 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 308 368 IPR004827 GO:0003700|GO:0006355
Vian2g01809 807 MobiDBLite consensus disorder prediction 276 301 - -
Vian2g01809 807 MobiDBLite consensus disorder prediction 171 242 - -
Vian2g01809 807 PANTHER BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED 88 804 - -
Vian2g01809 807 MobiDBLite consensus disorder prediction 527 554 - -
Vian2g01809 807 SMART brlzneu 306 370 IPR004827 GO:0003700|GO:0006355
Vian2g01809 807 MobiDBLite consensus disorder prediction 210 242 - -
Vian2g01809 807 MobiDBLite consensus disorder prediction 133 157 - -
Vian2g01809 807 FunFam bZIP transcription factor 49 309 371 - -
Vian2g01809 807 MobiDBLite consensus disorder prediction 696 715 - -
Vian2g01809 807 MobiDBLite consensus disorder prediction 527 547 - -
Vian2g01809 807 Gene3D - 308 370 - -
Vian2g01809 807 Coils Coil 333 353 - -
Vian2g01809 807 CDD bZIP_HY5-like 311 362 - -
Vian2g01809 807 MobiDBLite consensus disorder prediction 131 157 - -
Vian2g01809 807 MobiDBLite consensus disorder prediction 413 441 - -
Vian2g01809 807 MobiDBLite consensus disorder prediction 279 298 - -
Vian2g01809 807 SUPERFAMILY Leucine zipper domain 310 368 IPR046347 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01809 63 803 bZIP Transcription Factor Family AT2G40950 47.493 2.71e-169 504
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vian2g01809 bZIP_1 9.3e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01809 K25783 - gmx:100101871 1098.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01809 2 36472473 36475764 Vian2g01809 2 36472473 36475764 ECH