Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01797 ATGGAAGGAGAGGGTTATTGTGGGAGTTTCTTTCAGAGGTGCAAGCCTTACATAGCTATGATTTCTCTGCAATTTGGGTTTGCGGGTATGAACATAATCACTAAGGTCTCCCTCAACCGTGGGATGAGCCACTATGTGCTTGTGGTTTATAGACACGCCTTTGCTACTGCGGCTATTGCTCCTTTTGCTCTTGTTCTTGAGAGGAAAGTGAGGCCCAAGATTACATTTCTTATGTTCATGCAAATATTCGTGTTGGGTCTACTTGGGCCTGTGATTGATCAGAACTTATACTATGCGGGGTTGAAATTCACTTCCCCTACCTACTCATGTGCAATAAGCAACATGCTCCCTGCAATGACGTTTGTGATGGCTGCTATTTTCAGAATGGAAAAGTTGGACATGAGAAAACTTAGATGCCAAGCAAAAGTGATAGGAACTATAGTAACGGTTGCTGGGGCCATGTTGATGACACTGTACAAAGGGCAAGTCATCAGTTTCTTGGGTTCTCAGTACATGCATCACCCCAGAAATTATGTTCCAGAAAACACCACTGATTCTGGGGAAAAGGATTGGTTTAAGGGCTCTATTCTTCTCATAATTGCCACCCTTGCTTGGGCTTCTTTCTTCATCCTTCAGGCAAGTAATCAAGTGTTTTTAACTCAAACTGCAGTCACACTAAGGAAATACCCTGCTCAGCTCTCTCTCACAGCACTTGTGTGTGCCTTAGGTACACTGCAGTCGATTGCAGTTACCTTTGTCATGGAACACAAGACATCTGTTTGGAGCATTGGCTGGGATATGAACCTTCTTGCAGCAGCCTATGCTGGAATAATATCATCAGGAATCACCTACTATGTTCAAGGGATTGTCATGCAAAAGAAAGGGCCTGTTTTTGTAACTGCCTTCAGCCCTTTGATGATGATTATCGTAGCCATCATGGGTGCTTTCATCCTTGCAGAAAAAATATATCTTGGAGGGGTCATGGGAGCTATTCTCATAGTAATGGGACTTTACGCAGTTCTGTGGGGAAAATACAAGGAGAACAAGGAGAAAGAAGCGGAGATAACCATTGAGGGGATGAAGTGTTGTTCAGAAAATGGGAGGTTGGAGACTGTGGTGGAAGAAGCCGAAGCAAACAACGATATCGAGATGCAAAAGGGTGAAGAAACGTCGAGAGATTTAAGGGTAGCCATTGTTGTTCCAAAAGTTTAA 1212 0.4356 MEGEGYCGSFFQRCKPYIAMISLQFGFAGMNIITKVSLNRGMSHYVLVVYRHAFATAAIAPFALVLERKVRPKITFLMFMQIFVLGLLGPVIDQNLYYAGLKFTSPTYSCAISNMLPAMTFVMAAIFRMEKLDMRKLRCQAKVIGTIVTVAGAMLMTLYKGQVISFLGSQYMHHPRNYVPENTTDSGEKDWFKGSILLIIATLAWASFFILQASNQVFLTQTAVTLRKYPAQLSLTALVCALGTLQSIAVTFVMEHKTSVWSIGWDMNLLAAAYAGIISSGITYYVQGIVMQKKGPVFVTAFSPLMMIIVAIMGAFILAEKIYLGGVMGAILIVMGLYAVLWGKYKENKEKEAEITIEGMKCCSENGRLETVVEEAEANNDIEMQKGEETSRDLRVAIVVPKV 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01797 403 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 160 - -
Vian2g01797 403 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 346 - -
Vian2g01797 403 PANTHER WAT1-RELATED PROTEIN 15 351 IPR030184 GO:0016020|GO:0022857
Vian2g01797 403 Pfam EamA-like transporter family 17 157 IPR000620 GO:0016020
Vian2g01797 403 Pfam EamA-like transporter family 193 341 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01797 Vian-Chr2 36300001 36302055 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01797 1 401 Nodulin-like Gene Family AT5G07050 60.837 2.56e-172 485
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01797 - - pvu:PHAVU_001G118300g 726.087