LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vian2g01786	ATGGACCAAGGCCAGCGCCATGTCAGCGCCACCAGCGCAACTAACAGTCCCGTGCTCCGCTGCACAACCGTCTGCACTCTCCCCTTCGCGCGCCTCGTCGCCGCCTCCCGCCGCCGCCTCTTCCTCTCTGACTGTGCAGACGGTCGATCCGACGACGACGACGGCGCTGAGTGCGGGTACTCACGAGCGGTGTTGGTCCTCGACATGGTCTGGAACCTCGCCTTTGTCGTCGTTGCCGCCGGCGTCCTCCTCTCCACGCTTAGCGAGCGGCCGTCCACGCCGCTCAGACTCTGGCTCTGCGGCTACGCGTTCGAGTGCGTTCTTCATATGACTTTCGTCTTCTTTGAGTTCCGCGTCGGAGTTCGCGATTCCTTTGCTCACACTACCTATTGCATTGTGAAGAAGCTAGAGCCCATAAACACTCTGGCATCTTCTGTTTGGTGGGTGTTTGGATTTTATTGGATTGTTGTTGGTGGCCAAGCACTTTTGGAAGATTCTCCGAGGCTCTACTGGTTGAAAAAGGATTGTGCACGGGCAGTGGAGATAGGAAATAGGCTGTGGGATATCATAGAATTTGGCATAGGCTGTGGGAGACTGGTTTTCTTTGCTCTCTTCTGTATCATCCCAATAATAGCACTAGCTTATGCTATGAAAATCAGAGAAGGCGCATCAGAAGAAGATATCAGGTCACTTCCTATGTATATGTTTAGTCAGTCAAATTCATTGGTGATGGTTGATGACAACAAGAAACAGCTTGTTAACACAAAAGTAGATTCATGCAATGGAAGCCATATGAGTGAACTTTCTCTCAATCCAGATGATTCTGTGAGTTCTGACTCTGTGTTCTCGAATGCTGTATCTGCCTATGTCCATATGCTGATGGAGCAGAAGTGTACCGCCTTCCTTGTACCCACCATTTTCACTGTGAATGCATTGGCCGTTGGCTTCGATCAAAAGCAACCTGCCCGCTCTGCAAATTTAATATCCTTAGAGGTGATACGTTGGTTTGACCTTTCAGAGACAAAGATTGGACAATGGTAA	1041	0.5024	MDQGQRHVSATSATNSPVLRCTTVCTLPFARLVAASRRRLFLSDCADGRSDDDDGAECGYSRAVLVLDMVWNLAFVVVAAGVLLSTLSERPSTPLRLWLCGYAFECVLHMTFVFFEFRVGVRDSFAHTTYCIVKKLEPINTLASSVWWVFGFYWIVVGGQALLEDSPRLYWLKKDCARAVEIGNRLWDIIEFGIGCGRLVFFALFCIIPIIALAYAMKIREGASEEDIRSLPMYMFSQSNSLVMVDDNKKQLVNTKVDSCNGSHMSELSLNPDDSVSSDSVFSNAVSAYVHMLMEQKCTAFLVPTIFTVNALAVGFDQKQPARSANLISLEVIRWFDLSETKIGQW	346

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vian2g01786	346	PANTHER	TARGET OF ERK KINASE MPK-1	38	256	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vian2g01786	Vian-Chr2	36135265	36139285	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vian2g01786	52	275	C3H Transcription Factor Family	AT1G68070	35.366	7.09e-39	139

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vian2g01786	-		-	gmx:100806994	389.423