Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01782 ATGGAACACCATTTTGGTCAAGACGCTGCTCCTGCATCTGGGTCCTTTGATAAAACTAGGGTTTTGAACGTGAAGCCATTAAGAACGCTTGTTCCTGTGTTCCCTTCACCATCCAATCCTGCTTCATCTTCAGCTCCCCAAGGGGGTGCTCCATTTGTCTGTGTTTCACCTTCTGGTCCTTTCCCTTCTGGGGTTGCACCCTTCTATCCATTCTTCATCTCCCCGGAGTCCCAGAGGCTCTCAGAGCAGAATGCACAAACCCCCACTGGTCAACGTGTGCCTGCTACTCCTGCTGCTCCTATATCGACTGCTGTTCCAATTAATTCATTCAGGACGCCAACTGGAGCTACTAATGGTGATGTGGGCACATCGAGGAGGAGTACCCGAAGTCGGGGACAGGTCGCACAGGAAGATGGCTACAGTAATGCTGTGATAGAGGAAGTTGAGGCAGATGCAACAACTGTGACTAAAAGATCAAAGCGCAAGTTGCAGAACAAGATAAAGGGACCGCAGAGTGTTGGTTCTGGGGATGTTGATCCAGATGCAGTGGCTGCTGATATTCTCAAGTCACTTAACCCATTGGTTTTTAATGTACTAAATCAACCCGAAGGTAGCAGGGACTCAGTTGCATATACACTCATGATATATGAAGTAATGCGAAGGAAGCTTGGACAAATTGAGGACTCAAATAGGGCTGCTAACGCTGTAGCAAAACGACCAGACTTGAGGGCAGGTGCAATTATGATGAATAAAGGGATTCGGACCAACAGCAAGAAACATATTGGACTTGTGTCTGGTGTTGAGATTGGGGATATTTTCTTTTTCAGATTTGAATTATGCTTAGTGGGATTACATTCACCTTCTATGGCTGGAATTGATTACATCGGTACCAAAACCAGTCAAGAGGAAGAGCCCTTAGCTGTAAGTATTGTCTCATCTGGAGGGTATGAAGATGATGTGGAGGATGGGGATCTGCTGATTTACAGTGGCCAAGGTGGGGTTAACCGTGACAAGGGAGCAAGTGATCAAAAGCTTGAAAGGGGTAATCTTGCTTTGGATAACAGTGCTCATAGAGGTAACGAAGTGAGGGTAATTAGGGGTTTGAAGGATTTGTATCATCCAACGGGGAAGGTATATGTCTATGATGGTCTTTACAAGATTCAAGACTCCTGGGTGGACAAATCAAAATCTGGTTTCAATGTGTTCAAGTATAAATTAGGCAGGTTGCCTGGACAGCCTCCAGCATATATGATTTGGAAATCCATTCAACAATGGACTGAGAAATCTGCTCCAAGAGCTGGGGTTATATTGCCTGATCTTACTTCTGGGGCCGAAAAAGTACCTGTTTGTCTTGTGAATGATGTTGATGCCGAGAAGGGCCCTGCATATTTCACTTACCTCCCAAATCTTAAGAATTTGAGGCCAACTGCTCCCCTGGAATCCTCTATTGGATGTTCTTGTGTTGGTGGATGCCAACCTAACAATTCTAACTGTCCTTGTGTTCAAAAGAATGGTGGCTATCTACCATATTCTTCAGCTTCATTAATTGCAGACCTAAAATCTGTTATATATGAGTGTGGTCCTTCTTGTCAATGTCCTCCTAATTGCCGAAACAGGGTTTCTCAAAGTGGCTTGAAGTTTCGTTTGGAGGTTTATAAAACCAAGAATAAAGGATGGGCTCTTAGATCATGGGATGCTATTCGAGCAGGATCTTTCATATGTGAGTATGCTGGGGAAGTCATAGACAGTGCCAGAGTGGAGGAGGAGCTTGGTGGTGACAATCTTGATGATTACATTTTTGATTCTACTCGCATTTATCAACAACTGGAAGTTTTTCCAGATGACACTGAAGCTCCAAAAATCCCATCCCCCCTATATATATCAGCAATTAATGAAGGGAATGTTGCTCGGTTTATGAATCACAGCTGTTCTCCAAATGTATTATGGCGTCCAGTCATACATGAAAATAAGAATTTTTCAGATCTCCACATTGCTTTCTATGCAATTAGACATATCCCTCCTATGATGGAGTTAACTTTTGATTATGGGACGGTTCTTCCTCTCAAGGCAGGTCATAGGAAAAAGAAATGCTTATGTGAATCTGTGAAATGCAGGGGTTACTTTTGTTAA 2130 0.4362 MEHHFGQDAAPASGSFDKTRVLNVKPLRTLVPVFPSPSNPASSSAPQGGAPFVCVSPSGPFPSGVAPFYPFFISPESQRLSEQNAQTPTGQRVPATPAAPISTAVPINSFRTPTGATNGDVGTSRRSTRSRGQVAQEDGYSNAVIEEVEADATTVTKRSKRKLQNKIKGPQSVGSGDVDPDAVAADILKSLNPLVFNVLNQPEGSRDSVAYTLMIYEVMRRKLGQIEDSNRAANAVAKRPDLRAGAIMMNKGIRTNSKKHIGLVSGVEIGDIFFFRFELCLVGLHSPSMAGIDYIGTKTSQEEEPLAVSIVSSGGYEDDVEDGDLLIYSGQGGVNRDKGASDQKLERGNLALDNSAHRGNEVRVIRGLKDLYHPTGKVYVYDGLYKIQDSWVDKSKSGFNVFKYKLGRLPGQPPAYMIWKSIQQWTEKSAPRAGVILPDLTSGAEKVPVCLVNDVDAEKGPAYFTYLPNLKNLRPTAPLESSIGCSCVGGCQPNNSNCPCVQKNGGYLPYSSASLIADLKSVIYECGPSCQCPPNCRNRVSQSGLKFRLEVYKTKNKGWALRSWDAIRAGSFICEYAGEVIDSARVEEELGGDNLDDYIFDSTRIYQQLEVFPDDTEAPKIPSPLYISAINEGNVARFMNHSCSPNVLWRPVIHENKNFSDLHIAFYAIRHIPPMMELTFDYGTVLPLKAGHRKKKCLCESVKCRGYFC 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01782 709 SUPERFAMILY SET domain 423 689 IPR046341 -
Vian2g01782 709 SMART G9a_1 257 412 IPR003105 -
Vian2g01782 709 Pfam SAD/SRA domain 260 412 IPR003105 -
Vian2g01782 709 FunFam Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 245 427 - -
Vian2g01782 709 SMART preset_2 437 531 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Vian2g01782 709 MobiDBLite consensus disorder prediction 106 137 - -
Vian2g01782 709 SUPERFAMILY PUA domain-like 245 427 IPR015947 -
Vian2g01782 709 Gene3D SET domain 430 708 IPR046341 -
Vian2g01782 709 ProSiteProfiles Post-SET domain profile. 693 709 IPR003616 -
Vian2g01782 709 Pfam Pre-SET motif 441 539 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Vian2g01782 709 ProSiteProfiles YDG domain profile. 262 408 IPR003105 -
Vian2g01782 709 Gene3D - 244 429 IPR036987 -
Vian2g01782 709 SMART set_7 547 689 IPR001214 GO:0005515
Vian2g01782 709 MobiDBLite consensus disorder prediction 106 138 - -
Vian2g01782 709 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 124 708 IPR025794 GO:0016571
Vian2g01782 709 ProSiteProfiles Pre-SET domain profile. 483 544 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Vian2g01782 709 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 101 701 - -
Vian2g01782 709 ProSiteProfiles SET domain profile. 547 683 IPR001214 GO:0005515
Vian2g01782 709 Pfam SET domain 558 683 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01782 Vian-Chr2 36008423 36010552 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01782 6 708 Su(var)3-9 homologs AT1G73100 46.832 0.0 610
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Vian2g01782 SAD_SRA 6.6e-49 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01782 K24405 - gmx:100786650 1213.75