Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01777 ATGGGACGAATCAGCCTTCTGCTTGCAGATTTCGTTCTGTCTTTCATGTGGGTATGCTCCGGTGTTCTTGTTCGCGTCATCGTCTTCCAACATCTTGGCTTCGGTCACTCACCCCTCGGTGAGGTTATCAAAACCACCTTCTCCGTCGCCAGCATGTTCTTCTTCGCCTTCCTTGTCAAGATTACGCGTGGCGGCGCCTACAACCCCCTCACCGTTTTGGCTGATTCTATCTCTGGGGATTTTAACTACTTCCTCTACTGCGTTGGTGCTAGAATCCCCGCGCAGGTGGTTGGAAGTATTATTGGCGTTAAATTTCTTATTGATACCATTCCTGAAGTGGGACAGGGACCACGTTTGAACGTTGACATTCATCAGGGTGCACTCACAGAAGGATTACTAACCTTTGCAATTGTAACCATTTCACTTGGACTTGCCACAAAAATTCGTGAAAATTTCTTCATGAAGACTTGGATTTCCAGCCTCTCCAAATTAACACTTCATATTCTTGGTTCTGATCTGACTGGTGGTTGTATGAACCCTGCATCAGTGATGGGATGGGCTTATGCTCGTGGGGATCACATAACAAAGGAGCACTTCTTTGTATACTGGCTTGCTCCCATAGAGGCAACTATTTTAGCAGTGTGGACATTCAAATTACTGGTGCCGCCTGCAAAAGAAGATAACGCAGCCTTAAAACGTAAATCTGATTGA 711 0.4599 MGRISLLLADFVLSFMWVCSGVLVRVIVFQHLGFGHSPLGEVIKTTFSVASMFFFAFLVKITRGGAYNPLTVLADSISGDFNYFLYCVGARIPAQVVGSIIGVKFLIDTIPEVGQGPRLNVDIHQGALTEGLLTFAIVTISLGLATKIRENFFMKTWISSLSKLTLHILGSDLTGGCMNPASVMGWAYARGDHITKEHFFVYWLAPIEATILAVWTFKLLVPPAKEDNAALKRKSD 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01777 236 Gene3D Glycerol uptake facilitator protein. 3 235 IPR023271 -
Vian2g01777 236 PRINTS Major intrinsic protein family signature 160 182 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vian2g01777 236 PRINTS Major intrinsic protein family signature 87 106 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vian2g01777 236 PRINTS Major intrinsic protein family signature 200 220 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vian2g01777 236 PRINTS Major intrinsic protein family signature 5 24 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vian2g01777 236 PRINTS Major intrinsic protein family signature 129 147 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vian2g01777 236 SUPERFAMILY Aquaporin-like 6 232 IPR023271 -
Vian2g01777 236 PANTHER AQUAPORIN SIP2-1-RELATED 1 236 IPR044226 GO:0015267
Vian2g01777 236 Pfam Major intrinsic protein 7 216 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01777 Vian-Chr2 35935618 35937448 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01777 1 236 Major Intrinsic Protein MIP AT3G56950 60.338 5.07e-104 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01777 K09875 - gmx:100786138 417.157