Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01770 ATGGGATCTCAAGGTGGGGCAATCCAGGAGCCAAAGAATGGGTCTTTGGCAAGGCAAGGGTCTTTGTACAATCTCACCCTTGATGAGGTGCACAACCAGCTTGGAAATTTGGGGAAACCCTTAGGAAGCATGAATCTTGATGAGCTGCTCAAGGGTGTGTGGACTGCAGAATCTGGAACTGATGCATACATGCAGCAAGGTCAGGTAGCTTATGCTGGATCATCTTTGAATCCTCAAGGGAGTCTAACATTGTGTGGGGATCTTAGCAAGAAAACAATTGATGAGGTTTGGAGAGATATGCAACAGAAGAAGAGTGTTAGTCAGGAAAGAGAAAGACAGCCTACACTGGGTGAGATGACTCTGGAGGATTTCTTGGTGAAGGCTGGTGTGACTACTGACCCTTTCCCTAATGACGATAGTGCCATGGCCATGCCAGGGGTTGATTCCCAACACAACACATCACAACATGCTCATTGGCTGCAATACCAGCTCACCTCAGTGCAGGAGCAGCCACAACAACAACATCATCAACATCAAAATCAGCAGAATACTATGATGCCGGGTTTTTCGGGTTTTATGGCTGTTCAACAGCCTATGCCGGTTGTGGTGAATCCGGTTCTGGATGCAGGATACTCTGAAGCAATGCCGTCTTCTTTGATGGGTGCCTTATCTGATTCACAATCTGCAGGTAGGAAAAGGGCTGCCTCAGGTAATGTGGTTGAGAAAACTGTGGAGAGGAGGCAAAAGAGAATGATTAAAAATAGGGAATCAGCAGCTCGGTCCCGGGCTAGAAAGCAGGCTTACACACAAGAACTGGAGATTAAAGTTTCTCGTTTAGAAGAAGAGAATGAAAGGCTTAGAAGACAGAATGAGATAGAGAAGGTATTGCCAAGTGCACCGCCACCAGATCCTAAGCATCAGCTGCGCAGAACTAGTTCAGCTCCCCTTTGA 951 0.47 MGSQGGAIQEPKNGSLARQGSLYNLTLDEVHNQLGNLGKPLGSMNLDELLKGVWTAESGTDAYMQQGQVAYAGSSLNPQGSLTLCGDLSKKTIDEVWRDMQQKKSVSQERERQPTLGEMTLEDFLVKAGVTTDPFPNDDSAMAMPGVDSQHNTSQHAHWLQYQLTSVQEQPQQQHHQHQNQQNTMMPGFSGFMAVQQPMPVVVNPVLDAGYSEAMPSSLMGALSDSQSAGRKRAASGNVVEKTVERRQKRMIKNRESAARSRARKQAYTQELEIKVSRLEEENERLRRQNEIEKVLPSAPPPDPKHQLRRTSSAPL 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01770 316 CDD bZIP_plant_BZIP46 246 291 - -
Vian2g01770 316 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 244 289 IPR004827 GO:0003700|GO:0006355
Vian2g01770 316 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 249 264 IPR004827 GO:0003700|GO:0006355
Vian2g01770 316 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 244 296 - -
Vian2g01770 316 MobiDBLite consensus disorder prediction 283 316 - -
Vian2g01770 316 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 16 315 IPR043452 GO:0003700|GO:0045893
Vian2g01770 316 Gene3D - 244 296 - -
Vian2g01770 316 Coils Coil 262 296 - -
Vian2g01770 316 PRINTS cAMP response element binding (CREB) protein signature 259 279 - -
Vian2g01770 316 PRINTS cAMP response element binding (CREB) protein signature 279 296 - -
Vian2g01770 316 PRINTS cAMP response element binding (CREB) protein signature 141 156 - -
Vian2g01770 316 PRINTS cAMP response element binding (CREB) protein signature 241 257 - -
Vian2g01770 316 SUPERFAMILY Leucine zipper domain 246 292 IPR046347 GO:0003700|GO:0006355
Vian2g01770 316 SMART brlzneu 242 314 IPR004827 GO:0003700|GO:0006355
Vian2g01770 316 Pfam bZIP transcription factor 246 291 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01770 Vian-Chr2 35846721 35849998 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01770 1 316 bZIP Transcription Factor Family AT3G56850 56.615 1.60e-106 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vian2g01770 bZIP_1 8.5e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01770 K14432 - gmx:100783666 503.827