Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01769 ATGTACCACGCAAAGAAGTTTCCATCGGCTAGTATGGTGCCCTATAAATCTCAAGGTGGTGCTGAACAAATTGCAAATGTTGAGGTTTTGGGTGGATCTGCTGGAAAAAATGCCACACCGGCGGAAGGAAGTGGGAAACAGCGTTTAAGGTGGACATCTGATCTTCATGACCGTTTTGTGGATGCCATTACACAACTTGGTGGACCAGATAGGGCAACACCAAAAGGTGTCCTTAGAGTGATGGGTGTTCCTGGACTGACCATTTATCATGTTAAAAGCCATTTACAGAAATATCGTCTTGCAAAGTATTTACCTGAATCACCAGCTGATGGTAAAGACTCTAAAGATGAGAAGAGGAATTCTGGAGACAGCTTTTCTGGCGCAGATTCTTCTCCGGGAATGCCAATCAATGATGCCTTAAGAATGCAGATGGAGGTTCAGAAACGTCTGCATGAGCAGCTTGAGGTTCAGAAGCAATTACAAATGAGAATTGAAGCACAGGGTAAATACTTACAAAAGATCATAGAGGAACAGCAGAAATTAGGTAATACCTTAACAACCTCCGAAACACTTCCTTTATCGCATGATAAGCAAACTCATCCGCACTCGGAGGCTTCTGGATCTAGTGATGCCCTTGCAAGCACTTTGTCCCCTCGTAAAAAACAGAGAATCGATGATGGTTCCAAGGATGGCTTCACTGCTTCCCATGTAAGGAAGACTGAACAAAAGAATGAGTGCAATGTTGGTCAGTTGGATCCAAATTTGTATGATGATGCTGGGTTTGGATTTGATTTGGAGACAAACAAAGATGAACATAAGGAGAGTGGACAGTAA 834 0.4305 MYHAKKFPSASMVPYKSQGGAEQIANVEVLGGSAGKNATPAEGSGKQRLRWTSDLHDRFVDAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESPADGKDSKDEKRNSGDSFSGADSSPGMPINDALRMQMEVQKRLHEQLEVQKQLQMRIEAQGKYLQKIIEEQQKLGNTLTTSETLPLSHDKQTHPHSEASGSSDALASTLSPRKKQRIDDGSKDGFTASHVRKTEQKNECNVGQLDPNLYDDAGFGFDLETNKDEHKESGQ 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01769 277 FunFam Myb family transcription factor 45 103 - -
Vian2g01769 277 MobiDBLite consensus disorder prediction 191 277 - -
Vian2g01769 277 Coils Coil 137 157 - -
Vian2g01769 277 MobiDBLite consensus disorder prediction 106 123 - -
Vian2g01769 277 NCBIfam myb-like DNA-binding domain, SHAQKYF class 46 101 IPR006447 GO:0003677
Vian2g01769 277 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 43 103 IPR017930 -
Vian2g01769 277 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 37 230 IPR044848 GO:0003700
Vian2g01769 277 SUPERFAMILY Homeodomain-like 45 100 IPR009057 -
Vian2g01769 277 Gene3D - 45 104 - -
Vian2g01769 277 MobiDBLite consensus disorder prediction 219 245 - -
Vian2g01769 277 Pfam MYB-CC type transfactor, LHEQLE motif 134 180 IPR025756 -
Vian2g01769 277 MobiDBLite consensus disorder prediction 106 136 - -
Vian2g01769 277 MobiDBLite consensus disorder prediction 263 277 - -
Vian2g01769 277 Pfam Myb-like DNA-binding domain 49 99 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01769 Vian-Chr2 35832612 35835364 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01769 40 204 G2-like Transcription Factor Family AT3G13040 50.588 1.29e-49 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Vian2g01769 Myb_DNA-binding 2.7e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01769 - - gmx:100783132 479.944