Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01730 ATGGATTTCCTGCAATCTCCAGAAAATCAGATACTTCTCGGTGTGGCCGTGGCCGTAGTGGCTGTGGGGATTGGTGCTGTCTTTCTCTTTTCATCTAAGAAGCGCAAAGGTTGCTTGGATCCGGAGAACTTTAAACAGTTCAAACTTGTTAAGCGGTCACAGCTGAGCCATAATGTTGCAAAGTTCACATTTGCCCTCCCAACACCTACATCTGTTTTGGGTCTTCCAATTGGGCAACACATAAGTTGCAGGGGTAAAGATGCACAAGGTGAAGAGGTTATCAAACCGTATACCCCTACTACTTTGGATTCTGATGTTGGACATTTTGAACTAGTTATTAAGATGTACCCACAAGGTAGGATGTCTCACCATTTCCGTGAGTTGCGAGTTGGTGACTTCCTTGCTGTGAGAGGACCCAAGGGACGTTTTAAATATCAACCTGGTGAGGTCAGGGCATTTGGTATGCTTGCTGGAGGGTCGGGAATCACCCCAATGTTCCAAGTTGCTAGAGCTATATTAGAAAACCCTAATGACAAGACCAAAGTACATCTTATCTACGCCAATGTTACATATGAGGATATTCTTTTGAAGGAAGAACTTGATGGTCTTGCTTCTAACTATCCAGATCAATTCAAAGTATACTACGTCTTAAATCAGGTTTGGGATGGTGGTGTTGGATTTGTGACTAAGGAGATGATTCAAGCACATTGCCCTGCTCCAGCCCCTGATGTTAAGATCCTGAGATGTGGGCCACCACCTATGAACAAGGCCATGGCTGCAAACCTTGATGCTCTTGAATATGCTTCTGAGATGCAGTTCCAGTTCTGA 828 0.4444 MDFLQSPENQILLGVAVAVVAVGIGAVFLFSSKKRKGCLDPENFKQFKLVKRSQLSHNVAKFTFALPTPTSVLGLPIGQHISCRGKDAQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFRELRVGDFLAVRGPKGRFKYQPGEVRAFGMLAGGSGITPMFQVARAILENPNDKTKVHLIYANVTYEDILLKEELDGLASNYPDQFKVYYVLNQVWDGGVGFVTKEMIQAHCPAPAPDVKILRCGPPPMNKAMAANLDALEYASEMQFQF 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01730 275 Gene3D - 137 275 IPR039261 -
Vian2g01730 275 PANTHER NADH-CYTOCHROME B5 REDUCTASE 34 275 IPR001834 GO:0016491
Vian2g01730 275 CDD cyt_b5_reduct_like 47 275 - -
Vian2g01730 275 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 42 146 IPR017927 GO:0016491
Vian2g01730 275 FunFam NADH-cytochrome b5 reductase 136 275 - -
Vian2g01730 275 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 154 173 IPR001709 GO:0016491
Vian2g01730 275 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 192 203 IPR001709 GO:0016491
Vian2g01730 275 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 245 253 IPR001709 GO:0016491
Vian2g01730 275 SUPERFAMILY Riboflavin synthase domain-like 38 147 IPR017938 -
Vian2g01730 275 FunFam NADH-cytochrome b5 reductase 37 136 - -
Vian2g01730 275 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 134 270 IPR039261 -
Vian2g01730 275 Pfam Oxidoreductase FAD-binding domain 47 145 IPR008333 -
Vian2g01730 275 Pfam Oxidoreductase NAD-binding domain 155 258 IPR001433 GO:0016491
Vian2g01730 275 Gene3D Translation factors 37 136 - -
Vian2g01730 275 PRINTS Cytochrome B5 reductase signature 131 145 - -
Vian2g01730 275 PRINTS Cytochrome B5 reductase signature 192 203 - -
Vian2g01730 275 PRINTS Cytochrome B5 reductase signature 95 102 - -
Vian2g01730 275 PRINTS Cytochrome B5 reductase signature 73 84 - -
Vian2g01730 275 PRINTS Cytochrome B5 reductase signature 154 173 - -
Vian2g01730 275 PRINTS Cytochrome B5 reductase signature 245 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01730 Vian-Chr2 35374384 35381391 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01730 2 275 NADPH P450 reductases AT5G17770 83.094 1.19e-165 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01730 K00326 - gmx:100805390 508.834
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01730 2 35374384 35381391 Vian2g01730 2 35374384 35381391 ECH