Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01722 ATGGAAGATGAGAGGCAGAAAGAGGCAAAGAGTCCAAGGCATGGCCCTGAGAAGAGTGAAGCGGTTCGGTCGAGGTGGACTCCCAAGCCGGAACAAATTCTCATACTGGAATCCATCTTCAACAGTGGCATGGTGAACCCTCCCAAAGATGAAACCGTAAGAATAAGGAAGCTGCTTGAGAAATTCGGTGCTGTGGGTGATGCCAACGTCTTCTACTGGTTCCAGAACCGCCGCTCCAGATCCCGCCGCCGCCAGCGCCAGATGATGCAGCAGGCAGCCGCCACCGCTGCTGCGATTAACCAGCCACAGCCTCAGCCACAGCCTCAGCCTCAGCCTCAGCCTCAGCCTCAGCCTCAGCCTCAGCTTCAGCCTCATGGTCTTGTTGCTGGTGGTGCAATTCAGCATGATCATCATCATAATCAGGTTAACCTTGTTGCAAGTGAAAGTGCTACTTCAAACATTGGTCTTGGTTCTTGTGTTTCTTATGATCTCCTAGGTGGTTCCTCTTCATCGTGTAGTGGTGGTGGACAACAAGGCATGGGTGGTTTCTTTTCTGGTTCTTCTCCTCAAATGGGTTTTCCTGAAATAATTGATCACACCCCACCTTCCCCATCAGTTTTGTTCCCTCCTTTTGATCCCAATTTGACCTTCCAGACTGGATATGGAGGCACTGATATCTCAGCATTCATCACAGTTTTCATCAATGGGATTGCAACAGAACTTCCAAAGGGACCAATAGACATGAAGACTGTGTTTGGAGAAGATGTTATGCTAGTTCATTCCTCTGGAGTGCCTATTCTCGCCAATGATTTCGGATTCTTGATGCAGAACCTTCAGCATGGAGAAAGCTACTTTCTGGTATCAAAGCCAACATAA 876 0.4886 MEDERQKEAKSPRHGPEKSEAVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGAVGDANVFYWFQNRRSRSRRRQRQMMQQAAATAAAINQPQPQPQPQPQPQPQPQPQPQLQPHGLVAGGAIQHDHHHNQVNLVASESATSNIGLGSCVSYDLLGGSSSSCSGGGQQGMGGFFSGSSPQMGFPEIIDHTPPSPSVLFPPFDPNLTFQTGYGGTDISAFITVFINGIATELPKGPIDMKTVFGEDVMLVHSSGVPILANDFGFLMQNLQHGESYFLVSKPT 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01722 291 ProSiteProfiles 'Homeobox' domain profile. 19 84 IPR001356 GO:0003677
Vian2g01722 291 SUPERFAMILY Homeodomain-like 17 90 IPR009057 -
Vian2g01722 291 FunFam WUSCHEL-related homeobox 11 23 90 - -
Vian2g01722 291 MobiDBLite consensus disorder prediction 79 126 - -
Vian2g01722 291 Gene3D - 23 90 - -
Vian2g01722 291 Pfam Homeodomain 23 83 IPR001356 GO:0003677
Vian2g01722 291 SMART HOX_1 21 88 IPR001356 GO:0003677
Vian2g01722 291 MobiDBLite consensus disorder prediction 86 102 - -
Vian2g01722 291 PANTHER WUSCHEL-RELATED HOMEOBOX 11 1 290 IPR044558 GO:0003700|GO:0048830
Vian2g01722 291 MobiDBLite consensus disorder prediction 103 121 - -
Vian2g01722 291 MobiDBLite consensus disorder prediction 1 28 - -
Vian2g01722 291 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01722 Vian-Chr2 35220292 35222479 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01722 19 291 Wox Gene Family AT5G17810 43.986 4.44e-60 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Vian2g01722 Homeodomain 1.2e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01722 - - gmx:100818735 309.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01722 2 35220292 35222479 Vian2g01722 2 35220292 35222479 ECH