Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01720 ATGATGAAGATCAATGTAATATGGCCCTTGTTTTACATCATAGTTCCCTTAGCATTTGGGGAGTTGAAGGTTGGATTCTATGATTCTTCATGCCCAAAAGCAGAGTCCATTGTCAATAAACTTGTGCAGAATCGATTCGATCGTGACAAGACTATTACTGCAGCTTTGCTTCGCTTGCATTTCCATGACTGTGCTGTCAGAGGTTGTGATGCATCCATACTTATAAATTCCATAACGTCTAACACAGCAGAGAAAGAAGCAGGAGCAAACAACGACGTTCGGGGCTTTGACCTAATCGATGAAGTGAAGGAAAACCTGGAATCTGCATGCCCTTCAACAGTGTCATGTGCAGACATCATAACCCTAGCTACCCGAACTGCAGTGGCCTTATCTGGAGGACCCAAATACCAAGTTCCCACCGGAAGACGCGATGGATTGGTCTCCAACGTCGACGATGTCACCATTCCAGGACCCTTCCAACCCGTTTCAGTAATTTCTCAATTTTTCAATAGGAATTTGGGCCTCACAACGCAGGAAATGGTGACCCTTTTTGGTGCACACACGGTTGGTGTTGCACACTGCGGTTTGTTTGCTGGTAGACTCTCGAGTCCTGACCCTACAATGGACCCTGTTTTGAAAGCTAAGTTGGTGAAGTTGTGCAACAGGGGTGGTGATCCTTCTACGCCCTTGGACCAGAACACTTCTTTGCTTGTTGATAACGACTTCTACCAGCAGATTCTTGCCAAGAAAGGGGTGCTGCAGATTGATCAGCAGCTTGCCTTGGATAAAAGTACGAAAGGGTTTGTGACAGATTTGGCTTCTGACGAGGCTAAGTTCCAAAAGAGCTTTGCAAATGCGATGGTGAAGATGGGGAGTGTTGATGTTCTGGTTGGGAATCAAGGAGAAATTCGCAAGAAATGCTCGGTCTTCAATAAACGCAGCTAG 945 0.4593 MMKINVIWPLFYIIVPLAFGELKVGFYDSSCPKAESIVNKLVQNRFDRDKTITAALLRLHFHDCAVRGCDASILINSITSNTAEKEAGANNDVRGFDLIDEVKENLESACPSTVSCADIITLATRTAVALSGGPKYQVPTGRRDGLVSNVDDVTIPGPFQPVSVISQFFNRNLGLTTQEMVTLFGAHTVGVAHCGLFAGRLSSPDPTMDPVLKAKLVKLCNRGGDPSTPLDQNTSLLVDNDFYQQILAKKGVLQIDQQLALDKSTKGFVTDLASDEAKFQKSFANAMVKMGSVDVLVGNQGEIRKKCSVFNKRS 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01720 314 FunFam Peroxidase 156 290 - -
Vian2g01720 314 ProSitePatterns Peroxidases active site signature. 53 64 IPR019794 GO:0004601
Vian2g01720 314 Gene3D - 25 311 - -
Vian2g01720 314 Pfam Peroxidase 39 274 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian2g01720 314 PANTHER PEROXIDASE 25-RELATED 15 299 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian2g01720 314 PRINTS Plant peroxidase signature 178 190 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian2g01720 314 PRINTS Plant peroxidase signature 94 107 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian2g01720 314 PRINTS Plant peroxidase signature 113 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian2g01720 314 PRINTS Plant peroxidase signature 285 298 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian2g01720 314 PRINTS Plant peroxidase signature 31 50 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian2g01720 314 PRINTS Plant peroxidase signature 132 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian2g01720 314 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian2g01720 314 PRINTS Plant peroxidase signature 245 262 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian2g01720 314 PRINTS Plant peroxidase signature 229 244 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian2g01720 314 SUPERFAMILY Heme-dependent peroxidases 21 311 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vian2g01720 314 FunFam Peroxidase 25 160 - -
Vian2g01720 314 PRINTS Haem peroxidase superfamily signature 114 131 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian2g01720 314 PRINTS Haem peroxidase superfamily signature 179 194 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian2g01720 314 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian2g01720 314 PRINTS Haem peroxidase superfamily signature 132 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian2g01720 314 PRINTS Haem peroxidase superfamily signature 231 246 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian2g01720 314 CDD secretory_peroxidase 21 310 IPR033905 GO:0004601|GO:0042744
Vian2g01720 314 ProSiteProfiles Plant heme peroxidase family profile. 21 311 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian2g01720 314 Gene3D Peroxidase, domain 2 156 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01720 Vian-Chr2 35174986 35182658 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01720 1 311 Peroxidase AT4G26010 54.808 9.80e-121 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01720 K00430 - gmx:100777946 476.863