Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01717 ATGGCGCTTCATCAAAACTTCACTCGTGGACGTAAATCAGAGCAAGTACAGGCTGCTTGTCTCTATATTGCATTTCGGCACAACAACAAGCCGTACCTTCTTATTGATTTTTCAAATTATTTAAGAATAGATGTGAGAAATAATAGATTAATGTCATGTCATGTAGATTTGATTAAGCGAGGGAGTAAGGCGGTCTCTGATACTGCTCTGACCATTGTTGCAAGTATGAAACGAGACTGGATGCAGGTTGAGGAGTTGGATACATTGGCAAAGGAGCAAGAAAACAATCCAACAGTAATGCCAGAAGGTGAATTGAAAGGGGTTACTTCGAAAGATCTACTATGTGAGCGCAAGGACAGTGGGGCTTCCCATTTTGCACTTGGATTGTGTGAAGAATGCTATAAGGACTTAGATAAGCTCTCTGGTGGACTTGGTGGTGGTTCGGATCCTCCTGCATTCCAGCGTGCTGAGAGGGAAAGAGAGAAAAGGGCACTTCTCAAAGAGAGTGTTGATGAAGCATGTGATTTGGCGAATGCATCAAATGATCAGTTTAAGAGCCATAGAGAAGATTTGCCTGTGCCAGAAGGGGCTAATGTTGCTCATGAGTCCATTAAAGATGGTGAATATGATGATTCATTTAGAGAAGATGAATCAGAAACTTTATCTGATATTGATGATGAAGACGTTGATTTATACATTCATGATGAGAAGGAGAGGAAGATCAAGAAGATACTGTGGGAAGCAGTAAATCGGGAGTATCTTGAGGAGCAGGCAGCCAAGGAAGCACTTGCAGCAGCTAATAAGAAAGCTTTTGAGGCAAATTTTGAAAACTGTTCAGAGGATTTACTTGCACCAAGAGAGCTCGCTGCATCTGCTTCTGAAGCTGTGGCAAAATCCAGAAAGATTGTCTTGAAGGTGAGAATGTATTATGTAGACCTTCTAATCGAACAAGAAGAGAATGGATTTGATGATTCACTTAGAGAAGATGAATCAGAAACTTTGTCTGATATTGATGATTGTGACATCGATGTGTATCTTCACAATGAGGAGGAGAAGAATATCAAGAAGATGCTGTGGGAAAGAGTTAACCGAGTGTATGTTATGGAAGAGGCAGCCAAGAAAGCAGTTGCAACAGCTAATAAGAAAGCTTTTGAGGGAAATTTTGGAAACTGCTCAGAGGATTTCCTAGCAGCAAGAGAGCTAGCTGCAGCTGCGGCAAAATCCAGAAAGGGAATGAAGCAGCGACGAGCCCATGAAGCAAGAAACATTGCGCCAACTCAATCTGCTGCAGAGGCCTTCGGCCAAATGTCTAATGAAAAAAAGCAGAGGGAGATAAAAGGGGAAATGATTTTCAGTGTGAGTACCTGGTGGCTGAGATGTCTCTTTCTTGTTGTCGTGATGATGGTAGACACCATCGACTGCAACAACAGTGGGGCCAAGGACGGCAGCAGCGGCAACGAAGGTGAGAGTGGCAGGAACGAAGGCGACACCCAAAAACTGAGTGAATCGCAGCGGAGTGGCAGCGACGAAGGCGACACAAACAAAATGAAGGACTCCCGGAGGAGCGGCAGCGATGGTGATGGAGGCAGCGCTTGGGGAGAACAACGGTGCAACCGTTCTCGCAACAAATGGATGCACCCAACGTGGAGAGGAAGTCGCCGTAGAGGATGGAGAGGAAGAGGCCGCGAGAAATGGAGGAAGAGAAAGGCACATTCTACTTTCTCTCTCATGGGTGGCAACACTTTCTTCCGACGAACTCACCTTTTGAAGGACTTCATAGAGTTGTAA 1788 0.4474 MALHQNFTRGRKSEQVQAACLYIAFRHNNKPYLLIDFSNYLRIDVRNNRLMSCHVDLIKRGSKAVSDTALTIVASMKRDWMQVEELDTLAKEQENNPTVMPEGELKGVTSKDLLCERKDSGASHFALGLCEECYKDLDKLSGGLGGGSDPPAFQRAEREREKRALLKESVDEACDLANASNDQFKSHREDLPVPEGANVAHESIKDGEYDDSFREDESETLSDIDDEDVDLYIHDEKERKIKKILWEAVNREYLEEQAAKEALAAANKKAFEANFENCSEDLLAPRELAASASEAVAKSRKIVLKVRMYYVDLLIEQEENGFDDSLREDESETLSDIDDCDIDVYLHNEEEKNIKKMLWERVNRVYVMEEAAKKAVATANKKAFEGNFGNCSEDFLAARELAAAAAKSRKGMKQRRAHEARNIAPTQSAAEAFGQMSNEKKQREIKGEMIFSVSTWWLRCLFLVVVMMVDTIDCNNSGAKDGSSGNEGESGRNEGDTQKLSESQRSGSDEGDTNKMKDSRRSGSDGDGGSAWGEQRCNRSRNKWMHPTWRGSRRRGWRGRGREKWRKRKAHSTFSLMGGNTFFRRTHLLKDFIEL 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01717 595 MobiDBLite consensus disorder prediction 476 564 - -
Vian2g01717 595 MobiDBLite consensus disorder prediction 409 435 - -
Vian2g01717 595 Gene3D Single helix bin 328 376 - -
Vian2g01717 595 MobiDBLite consensus disorder prediction 492 524 - -
Vian2g01717 595 Pfam Transcription factor TFIIB repeat 2 45 IPR013150 GO:0017025
Vian2g01717 595 SUPERFAMILY Cyclin-like 2 45 IPR036915 -
Vian2g01717 595 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 2 441 IPR000812 GO:0006352|GO:0070897
Vian2g01717 595 Pfam Brf1-like TBP-binding domain 335 441 IPR011665 -
Vian2g01717 595 Pfam Brf1-like TBP-binding domain 222 273 IPR011665 -
Vian2g01717 595 MobiDBLite consensus disorder prediction 476 491 - -
Vian2g01717 595 Gene3D - 1 61 - -
Vian2g01717 595 Gene3D Single helix bin 199 263 - -
Vian2g01717 595 MobiDBLite consensus disorder prediction 546 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01717 Vian-Chr2 35055024 35093505 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01717 2 301 Inorganic Solute Cotransporters AT2G01280 29.443 6.99e-20 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01717 K15196 - gmx:100817609 298.13