Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01713 ATGTTCTCCAACACCAAAGTTTCTGTCTCCAAACGCATGGGGTTCAGAGTCAATTTCACTTCGTTCCTGAATATCTCATTCCTCATGATCGTGTTTTGTGTTTCTCTTATTTCCCACTTCCATTCTTCGGATCATGTTGTTCTGAGGAGAAACCGGTTAGGCTTGAGGGAGGGCGAAAAGGATTGCAAAAGTTTCCACAATTTGAAAGACTCAAAAGCCAAGTGCTTGTACTTGAAATCCAATGATCCGTGTGTTTCTCAGGGTTATGTCGACTACCTTTACATTTTCTATTGCAAAGTGGGGGATTTCCCTCTTTTGGGTCATAGTCTTTTGTTTCTTTGGCTTTTGGTTCTGTTCTACCTGTTGGCCAACACTGCCTCTGACTACTTTTGTCCTTCTCTTGAGCACTTGTCCAAATTGCTGAGGCTCTCTCCCACGATTGCTGGGGTGACTCTTCTCTCTCTTGGAAATGGTGCTAATGACGTTTTTGCCGCCCTTGTCTCTTTCAAGGGTAGTGGGACCCAGGACATTGGTTTCAACACTGTGCTTGGAGGTGCATCCTTTGTTTCCTGTGTTGTGGTTGGAATAGTGAGCATTTCAATTAGGGAAAGGGGGATTCGGGTCAAGAAGTGGGCCTTGGTGAGAGATGTCTGTTTCCTTCTCCTGGTTCTTTTCTGTTTGTTGATCATTTTGATCACTGGTGAAATCAGTGTTCCCGGGGCAATTGGTTTTTGCTTGATGTATGTGGTGTATGTGGTGGTTGTTTATGTCTCATCTAAACGAGGGAATAAAGGTGTATGCGACGATGCTGATACTGAAAGTGATGGTGATTTGAGTCATGGTGGTGGCAATGATTTAGGTGTGCCTTTGCTTATTGGCTTGGAGAAAGGACTTGCAGATACAGGTCAGGAATTTGACGTGAAAATAGGGAGGAAATGTTGCTGTTTAAAATCTTCAATTTGTAGAATGCTACTTTTTGTCATGGAGATGCCACTTTACTTGCCTAGGAGATTGACAATTCCTGTTGTTTGTGAAGAGAGATGGTCCAAAGGGTATGCAGTTTGTTCAGCTATGCTAGCACCACTTCTACTGTCTTTCTTATGGGTACCAAACCAGGAAAAAAACTTCAACTCAAGCCTTATTGTTTGTGGAATTGGATTGTTGCTTGGGATTACACTAGGGGTAACAACATTTTTCACAACCAATGTGTCAAGCCCTCCAAGGAAGTACTTGTTTCCTTGGCTTGCAGGAGGATTTGTGATGAGTGTGACTTGGAGCTACATTTCAGCACAAGAATTGGTGGGGTTGCTGGTTTCACTTGGTTACATATGTGGGGTCAGTCCTTCAATCCTGGGGCTAACAGTTCTTGCCTGGGGAAATTCAATTGGGGATTTGGTTACAAATTTGACAATGACATTGTATGGCGGATCAGAAGGTGCTCAAATTGCAATATCAGGGTGTTATGCTGGTCCTATCTTCAATATAGTGGTTGGATTAGGCTTATCTCTTGTGAACACTACTTGGTCAGAGTATCCATTTTCTGTTGAGATTCCTAAAGATCCATATCTTTGGGAGACATTAGCACTTTTGGCAGTTGGGTTGGTTTGGGCTCTTGTTGTGTTGATTAGAAGAGATATGAAACTTGATGCAGTATTGGGAGTAGGACTCTTGGTTATTTACTTCATTTCTCTGTTTCTGAGGCTGATTCAGACACTTGGGTCACTCCATTTTCAGAATATGATAAACTCACTCTTCATAACATCATAG 1767 0.425 MFSNTKVSVSKRMGFRVNFTSFLNISFLMIVFCVSLISHFHSSDHVVLRRNRLGLREGEKDCKSFHNLKDSKAKCLYLKSNDPCVSQGYVDYLYIFYCKVGDFPLLGHSLLFLWLLVLFYLLANTASDYFCPSLEHLSKLLRLSPTIAGVTLLSLGNGANDVFAALVSFKGSGTQDIGFNTVLGGASFVSCVVVGIVSISIRERGIRVKKWALVRDVCFLLLVLFCLLIILITGEISVPGAIGFCLMYVVYVVVVYVSSKRGNKGVCDDADTESDGDLSHGGGNDLGVPLLIGLEKGLADTGQEFDVKIGRKCCCLKSSICRMLLFVMEMPLYLPRRLTIPVVCEERWSKGYAVCSAMLAPLLLSFLWVPNQEKNFNSSLIVCGIGLLLGITLGVTTFFTTNVSSPPRKYLFPWLAGGFVMSVTWSYISAQELVGLLVSLGYICGVSPSILGLTVLAWGNSIGDLVTNLTMTLYGGSEGAQIAISGCYAGPIFNIVVGLGLSLVNTTWSEYPFSVEIPKDPYLWETLALLAVGLVWALVVLIRRDMKLDAVLGVGLLVIYFISLFLRLIQTLGSLHFQNMINSLFITS 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01713 588 Gene3D - 353 568 IPR044880 -
Vian2g01713 588 Gene3D - 143 268 IPR044880 -
Vian2g01713 588 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 318 576 - -
Vian2g01713 588 Pfam Sodium/calcium exchanger protein 415 567 IPR004837 GO:0016020|GO:0055085
Vian2g01713 588 Pfam Sodium/calcium exchanger protein 112 256 IPR004837 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01713 Vian-Chr2 35020495 35022261 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01713 15 576 Antiporters AT5G17850 52.014 1.50e-169 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01713 K13754 - gmx:100787016 861.292