Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01711 ATGGCACCCTTCATCATCTTCAAGTCCAAGCTTCAATCTAGAGTACTTGTTCTTGTCCTCAACTTGGCTTTCATCTTCCTCTTCTGTCTACTTCTCAACCTTTATCTCCACCCTCCTAACGAAAATTCTCAAGGCCACTCCAATGCCTCTTTCCTCTCAATCTTCAACCATGCAAGGCTCTTCAGAGATGTCAGCGTTGAAGGCTGCACTGATATACACAAGTATTCAGATTTTGACTCCAAGTGTTTGTATGTCAGAACTAATCTCGAGTGCAGGTCAAAGGGATACATCAACTATCTTCAAATCTTCTACTGCAACTCTGGAAAATTCCCAATTTTTGGACAAGCCCTCCTTGCCTTGTGGCTTGTAGTGTTGTTTTATCTGTTGGGTGACACGGCTTCCAACTACTTTTGCAGTTCCTTGGAGGGTTTGTCCAACATCTTGAGGCTCTCCCCCACCATTGCAGGAGTGACCCTTCTTTCTCTGGGAAATGGCGCTCCTGATTTCTTTGCCAGCGTTGTGTCTTTCTCAGGATCATCCAGCAACGGTGCCGTAGGACTCAACAGCATCCTAGGAGGTTCTTTCTTTGTGTCGTGTGTTGTCTTGGGGGTCATAAGCATTCTGGTTAGCCCAAATCAGGTTGAGGTTGAAAAGGCCAGTTTCATCAGGGATGTCCTTTTCTTCCTTCTCTCTCTTCTCATCCTCCTTATCATAATTTACATCGGTAAAATCACTTTGTTTGCTTCAATCTGCTATGTTTCTATCTACTTCCTCTACGTCTGTGCTGTCTCAGCCACACATCTCATATACGGAGGGGACACAACAAATGCAAGGCAATATTCAATGTCTTCTGACGAATCATCAGCGCCTAGCATACCTTTGTTGGGCTATGTTGATGAAGAGAAACAAAGTTTGGCAGAGATAGTGGTGGTTGAAGATAAGGACCAAAAGCCAGCCAGTACTTTCGGTGATGACTCATTCTTTGGTTGCCTCTACTTTGGAAAGTTGCTACAAGTGCTAGAACTACCTCTTTGCTTACCAAGAAGGCTTACAATTCCTGTGGTGAGTGAGGAGAAGTGGTCAAAGCCATTTGCAGTAATATCTGTCACATTAGCACCAGTTTTACTTGCAGTTCTTTTCAACACTCAAGGTGAAAACGTGGCTTCAAGGAGTAGCCTGGTTACATACATAGTAGCTGCTTTGATTGGGATAGTTTTGGGCAACATGGCATGCGTGACAACTGATAGGTGTAGCCCACCAACCAAGTCCTTGTTTCCTTGGCTAGCTGGTGGCTTTGCCATGAGTGTAACATGGACTTACATAATTGCTGCCGAGCTAGTTTCTGTCTTGGTTTCAATTGGGAGCATAATTGGGGTTAGCCCTTCAGTGCTAGGACTAACTGTCCTAGCTTGGGGGAACTCACTTGGGGACTTCATAGCCAATGGTGCCATGGCCTTAAATGGTGGGGCAGATGGTGTTCAAATGGCCATATCTGGTTGCTATGCTGGTCCAATGTTCAATACCTTGATGGGTTTGGGGTTACCCCTTGTTCTCTCAGCTTTGTCTGATCATCCAGACCCTTATGTGATTCCCAAGGATCCTTCACTGTATGAGACAATTTTGTTCTTGATGGGAGGGCTTCTTTGGGCACTTGTGATATTGCCAAAGAAGAGTATGAGGTTGGATAAATCCTTAGGGGTAGGGCTTCTAAGTGTTTACCTCTGTTTTTTGGTTATAAGGATTGCTCTGGCTTTTGGGGTTGTGAAATTCTAG 1773 0.4473 MAPFIIFKSKLQSRVLVLVLNLAFIFLFCLLLNLYLHPPNENSQGHSNASFLSIFNHARLFRDVSVEGCTDIHKYSDFDSKCLYVRTNLECRSKGYINYLQIFYCNSGKFPIFGQALLALWLVVLFYLLGDTASNYFCSSLEGLSNILRLSPTIAGVTLLSLGNGAPDFFASVVSFSGSSSNGAVGLNSILGGSFFVSCVVLGVISILVSPNQVEVEKASFIRDVLFFLLSLLILLIIIYIGKITLFASICYVSIYFLYVCAVSATHLIYGGDTTNARQYSMSSDESSAPSIPLLGYVDEEKQSLAEIVVVEDKDQKPASTFGDDSFFGCLYFGKLLQVLELPLCLPRRLTIPVVSEEKWSKPFAVISVTLAPVLLAVLFNTQGENVASRSSLVTYIVAALIGIVLGNMACVTTDRCSPPTKSLFPWLAGGFAMSVTWTYIIAAELVSVLVSIGSIIGVSPSVLGLTVLAWGNSLGDFIANGAMALNGGADGVQMAISGCYAGPMFNTLMGLGLPLVLSALSDHPDPYVIPKDPSLYETILFLMGGLLWALVILPKKSMRLDKSLGVGLLSVYLCFLVIRIALAFGVVKF 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01711 590 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 23 589 - -
Vian2g01711 590 Pfam Sodium/calcium exchanger protein 428 581 IPR004837 GO:0016020|GO:0055085
Vian2g01711 590 Pfam Sodium/calcium exchanger protein 119 262 IPR004837 GO:0016020|GO:0055085
Vian2g01711 590 Gene3D - 150 278 IPR044880 -
Vian2g01711 590 Gene3D - 363 582 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01711 Vian-Chr2 35000533 35002305 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01711 77 589 Antiporters AT5G17860 51.638 2.99e-173 500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01711 K13754 - gmx:100811635 890.952