Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01692 ATGCCTGAAGAAACGACGTCGATTGACTACGTCATGGAGGCCGCATCTGGGGCCCACTTCTCCGGCCTTAGACTCGACGGCTTGCTACCTTCCTCCGCCACCGCTTCCGCCGCTCCTGATTCAACCCTAGCCCCGGATTCCCACCCCAATCGCCCTTTCGTTATTGGAGTTTCCGGAGGTACTGCCTCTGGGAAAACCACTGTCTGCGACATGATCATTCAGCAGCTTCACGATCACCGCGTCGACTCCTTTTATCGTGGGCTGAGACCGGAAGAGTTGGAACGTGTTCATGAGTACAATTTCGATCACCCTGATGCTTTTGACACCGAGCAGTTGTTAGAGTGCATGGGGAAACTCATTAGTGGCCAGGGCGTGCACGTTCCCATCTATGACTTCAAGAAACATCAGCGTTCTTCTGATAGTTTTCGCCAGGTTAATGCCTCTGATGTGATTATATTGGAGGGGATTCTTGTATTCCACGATCAGCATGTGCGGGATCTCATGAACATGAAGATCTTTGTAGACACAGATGCTGATGTGAGGCTTGCTCGTAGAATTAGACGTGACACAGTTGAGAGGGGCAGGGATATAAACTCTGTTCTTGAACAGTATGCAAAATTTGTTAAGCCTGCATTTGATGATTTTGTTCTACCATCAAAAAAGTATGCCGATGTGATCATTCCTCGTGGAGGTGATAATCATGTAGCCATTGATTTGATCGTGCAACATATTCGGACAAAGCTTGGTCAACATGATCTATGCAAAATATATCCAAATGTCTATGTTATTCAGTCTACGTTCCAGATAAGAGGGATGCATACATTGATTAGGGACCGAGACATATCAAAGCATGATTTCGTGTTTTACTCAGATCGTCTTATACGCCTGGTTGTTGAGCATGGTCTAGGTCATCTGCCTTTCACCGAAAAGCAAGTGGTTACTCCCACAGGATCTGTCTATACTGGTGTTGATTTCTGCAAAAAGTTGTGTGGTGTTTCAATTGTACGAAGTTCAGCAAACATTGAGACTCTAGTAGTACTAAAACTGGAGTTATTCACTTCAAGACTCTGTTCCTGGACTTATTGTTCTACATTGTTTTTGGATTATAGTGGTGAGAGCATGGAAAATGCACTTCGTGCATGTTGTAAAGGCATTAAAATTGGTAAAATTCTGATTCACCGGGATGGAGACAACGGAAAACAGCTTATATATGAAAAGCTTCCCAAGGATATTTCAGAACGGCATGTTTTGCTTCTTGACCCGGCTCCTGAGGGAATCCATTGCGTGTGTAAAAGGTTTCCGTCATTGAAGATTGTAACATCTGAGATTGATGTTGAACTGAATGAAGAGTACCGTGTTATCCCAGGATTAGGTGAATTTGGTGATCGCTACTTTGGCACCGATGATTGA 1410 0.4454 MPEETTSIDYVMEAASGAHFSGLRLDGLLPSSATASAAPDSTLAPDSHPNRPFVIGVSGGTASGKTTVCDMIIQQLHDHRVDSFYRGLRPEELERVHEYNFDHPDAFDTEQLLECMGKLISGQGVHVPIYDFKKHQRSSDSFRQVNASDVIILEGILVFHDQHVRDLMNMKIFVDTDADVRLARRIRRDTVERGRDINSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYPNVYVIQSTFQIRGMHTLIRDRDISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSVYTGVDFCKKLCGVSIVRSSANIETLVVLKLELFTSRLCSWTYCSTLFLDYSGESMENALRACCKGIKIGKILIHRDGDNGKQLIYEKLPKDISERHVLLLDPAPEGIHCVCKRFPSLKIVTSEIDVELNEEYRVIPGLGEFGDRYFGTDD 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01692 469 MobiDBLite consensus disorder prediction 34 57 - -
Vian2g01692 469 FunFam Uridine kinase 49 250 - -
Vian2g01692 469 CDD UMPK 54 247 IPR000764 -
Vian2g01692 469 NCBIfam uridine kinase 52 247 IPR000764 -
Vian2g01692 469 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 48 240 IPR027417 -
Vian2g01692 469 PANTHER URIDINE KINASE 47 410 - -
Vian2g01692 469 Pfam Uracil phosphoribosyltransferase 265 421 - -
Vian2g01692 469 Pfam Uracil phosphoribosyltransferase 422 467 - -
Vian2g01692 469 Pfam Phosphoribulokinase / Uridine kinase family 54 235 IPR006083 GO:0005524|GO:0016301
Vian2g01692 469 Gene3D - 49 250 IPR027417 -
Vian2g01692 469 PRINTS Uridine kinase signature 215 228 - -
Vian2g01692 469 PRINTS Uridine kinase signature 52 69 - -
Vian2g01692 469 PRINTS Uridine kinase signature 179 189 - -
Vian2g01692 469 PRINTS Uridine kinase signature 122 137 - -
Vian2g01692 469 PRINTS Uridine kinase signature 193 204 - -
Vian2g01692 469 SUPERFAMILY PRTase-like 258 468 IPR029057 -
Vian2g01692 469 Gene3D - 251 346 IPR029057 -
Vian2g01692 469 Gene3D - 423 467 IPR029057 -
Vian2g01692 469 Gene3D - 367 422 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01692 Vian-Chr2 34680788 34686463 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01692 1 469 PRT Gene Family AT5G40870 73.114 0.0 725
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01692 K00876 - gmx:100780005 791.186