Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01671 ATGCGAAAGGGAATAGGAAGGGCGGCGTCGGTGGTCATGGCGGCGGCTGCGGCGGCCAACAAATCCCTTTTAAAGGAGCCTCGGTACCGAGGCGTGAGAAAGAGACCGTGGGGGAGGTTTGCGGCGGAGATCAGAGACCCGTTGAAGAAAGCCAGGGTTTGGTTAGGAACCTTCGATTTTGTCGAGGAAGCTGCTCAAGCCTACGACGCCGCCGCACGGACTCTCCGGGGTCCCAAGGCCAAAACAAATTTCCCTCTTTCACACCCTTTCTACATCGTCTCCTCGTCGTTCCGCCCTCCCCTGCCTTTTGATCTCAACGCGCCACCGTTCGACGATGCCGCTGCCGATGACGATCTCCGCTGCACCGCGCTCTGCCTCCTGAACGTGCCGTGGTGGTTTTTAATTTCCAAATTTTTTCACCCTTGA 426 0.5751 MRKGIGRAASVVMAAAAAANKSLLKEPRYRGVRKRPWGRFAAEIRDPLKKARVWLGTFDFVEEAAQAYDAAARTLRGPKAKTNFPLSHPFYIVSSSFRPPLPFDLNAPPFDDAAADDDLRCTALCLLNVPWWFLISKFFHP 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01671 141 CDD AP2 27 87 IPR001471 GO:0003700|GO:0006355
Vian2g01671 141 Pfam AP2 domain 27 77 IPR001471 GO:0003700|GO:0006355
Vian2g01671 141 FunFam Ethylene-responsive transcription factor 2 28 86 - -
Vian2g01671 141 ProSiteProfiles AP2/ERF domain profile. 28 85 IPR001471 GO:0003700|GO:0006355
Vian2g01671 141 PRINTS Ethylene responsive element binding protein signature 29 40 IPR001471 GO:0003700|GO:0006355
Vian2g01671 141 PRINTS Ethylene responsive element binding protein signature 51 67 IPR001471 GO:0003700|GO:0006355
Vian2g01671 141 SUPERFAMILY DNA-binding domain 28 87 IPR016177 GO:0003677
Vian2g01671 141 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 22 98 - -
Vian2g01671 141 Gene3D AP2/ERF domain 28 87 IPR036955 GO:0003700|GO:0006355
Vian2g01671 141 SMART rav1_2 28 91 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01671 Vian-Chr2 34371993 34372418 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01671 1 86 AP2-EREBP Transcription Factor Family AT3G20310 72.093 8.25e-36 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Vian2g01671 AP2 6.4e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01671 K09286 - gmx:100803943 128.257