Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01635 ATGAACATGAATATGTGCCAAAGTGTATCAGTTACCACTGAATGCCACCAAGAGCAGGTTTTTGCCCCTTCTTGCTCAAGCAGCCTTGATGACCTCTTCTCTGCTCAGAACACGGAAGTGGATGTTGAGTTGGAGTGGCTTTCGGAGTTTGTGGAGGACTGCTTTTCGAGTCCCCCAAGTTTTGTGTTGGGAGGCGGTGGGGCTAAGAGTAATACAAGCATAATAAGCATAAGCACAGGCGGCAGCAGCAGCAGCAGCAAGGGTTGTTCTTCAGGCACATTGAAGAGAGCCCAAGAGAATGAGTGTCCTTTGCAGAATTTTGCTGTGCCTGGGAAGGCGAGGAGCAAAAGGAAAAGGCTTTCGGCCCCTAGAACGAAGGACCCTTTGAGCATATGGTCACAGCATTTGAACCCCCAAAACGAAGCCTTGAGTTCTGACCCTCCACTCCTGAAACAGGCTTATTGGTTGGCTGACAGTGAACTGATGATGCCAAAGGCAAAGGAGGAGCAAGAAGTGAGGAAAGTGGTGATTGGGGAGTGTGAGGTTGAAGGTAGCAGTGGTCAACAAGCAATGGCAAGGAGATGCAGCCATTGCTTGGCTCAGAGGACCCCACAGTGGAGGGCAGGACCATTAGGTCCAAAGACACTTTGCAATGCATGTGGAGTTAGGTACAAGTCTGGTAGGTTACTACCAGAGTATAGGCCAGCCAAGAGTCCTACTTTTGTTAGCTACTTGCACTCCAATTCCCACAAGAAAGTCATGGAGATGAGGATGTCTGTTTACTCTTCCATTTCTTCTGACCTTTAG 807 0.4895 MNMNMCQSVSVTTECHQEQVFAPSCSSSLDDLFSAQNTEVDVELEWLSEFVEDCFSSPPSFVLGGGGAKSNTSIISISTGGSSSSSKGCSSGTLKRAQENECPLQNFAVPGKARSKRKRLSAPRTKDPLSIWSQHLNPQNEALSSDPPLLKQAYWLADSELMMPKAKEEQEVRKVVIGECEVEGSSGQQAMARRCSHCLAQRTPQWRAGPLGPKTLCNACGVRYKSGRLLPEYRPAKSPTFVSYLHSNSHKKVMEMRMSVYSSISSDL 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01635 268 ProSitePatterns GATA-type zinc finger domain. 195 220 IPR000679 GO:0006355|GO:0043565
Vian2g01635 268 SMART GATA_3 189 243 IPR000679 GO:0006355|GO:0043565
Vian2g01635 268 CDD ZnF_GATA 194 241 IPR000679 GO:0006355|GO:0043565
Vian2g01635 268 ProSiteProfiles GATA-type zinc finger domain profile. 189 225 IPR000679 GO:0006355|GO:0043565
Vian2g01635 268 MobiDBLite consensus disorder prediction 105 130 - -
Vian2g01635 268 Pfam GATA zinc finger 195 229 IPR000679 GO:0006355|GO:0043565
Vian2g01635 268 Gene3D - 185 257 IPR013088 GO:0006355|GO:0008270
Vian2g01635 268 FunFam GATA transcription factor 185 267 - -
Vian2g01635 268 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 191 253 - -
Vian2g01635 268 PANTHER GATA TRANSCRIPTION FACTOR 23 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01635 Vian-Chr2 33984723 33985779 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01635 42 257 C2C2-Gata Transcription Factor Family AT4G32890 40.991 2.52e-45 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Vian2g01635 GATA 6.8e-15 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01635 - - gmx:100786479 397.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01635 2 33984723 33985779 Vian2g01635 2 33984723 33985779 ECH