Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01625 ATGGTTTTGGTGTGGTCAAGAAAAGGGACAAAGAACATGGACTTAACTCTCTTTTCACTTCTATTCTTGTTACTATTGCCTGCACTCTCTTCTTCCATATATGTTGGGAACAATATCTTGTTCAATCATCGCAAGATATTCCCCAAACAACAAGAACTTACTTCGTACGCTGTGATCTTTGATGCCGGTAGCACTGGTAGCCGTGTCCATGTCTTTCATTTCGACCAGAACTTAGATCTTCTTCACATAGGCAACGAGATTGAGTTTTATGATAAGGTGACACCTGGTTTGAGTGCATATGCGGATAATCCTGAAAATGCAGCAAAATCTCTGCTTCCACTTTTGGAGGAAGCTGAAAGTGTTGTCCCTGAGCACCTCTACCCCACCACACCTGTTAAACTTGGGGCGACTGCAGGTCTAAGGCTTTTGGATGGGGATGCTTCTGAAAGGATATTGCAAGCGGTTAGCGATTTGCTCAAGAACAGAAGTACCTTCAGCGTTCAACCAGATGCTGTAGCTATAATTGATGGAACCCAAGAAGGTTCTTATCTATGGGTGACAGTAAACTATTTACTAGGGAATTTGGGGAAGAATTTTTCAAAGACAGTGGGAGTAGTTGATCTTGGAGGTGGATCGGTTCAAATGACATATGCTGTCTCAAAGAACACAGCAAACAATGCTCCACAACCACCAGAAGGAGAGGAACCTTACATAAAGAAACTTGTCCTCAAGGGAAAGAAATATGACCTCTATGTTCACAGTTACTTGCGCTATGGTAGAGAGGCATTTCGTGCTGAGGTTTTGAAGGTCACTGATGGTTCTGCTAACCCTTGTATTTTATATGGCTTTGATGGGACCTACACATATTCTGGAGAAGACTATAAGGCCTTTGCTCCCATTTCTGGATCCAACTACCATGAATGCAGAAAGATAGCTCTTCAAGCTCTGAAAGTGAACCAGTTTTGCCCCCACCGAAATTGTAGTTTTGGAGGGATATGGGATGGTGGAAAGGGAAGTGGACAAAACATTCTTTTCGGCACTTCATCTTTCTATTATCTGCCTTCGGAGATTGGTATGTTTAATCCAAATAAACCCAACTCCAAGATTCATCCTTTGGATTTGAAGACTGAAGCAAAGAGAGCTTGTGAAACAACATTTGAGGATGCCAAATACACTTATCCACTTCTTTCAGCTGATAAACTTCCATATGTATGCTTGGACCTTACATACCAGTATGCATTGTTTACTGATGGATTTGGCTTAGATCCATTGCAAGAGATCACAATGGCAAATCAAATTGAATATCAGGAAGCACTTGTGGAAGCAGCATGGCCTTTAGGCACTGCCATAGAAGCCATATCTTCATTGCCTAAATTTGATCCATTCATGTATTTTATTTAA 1401 0.4147 MVLVWSRKGTKNMDLTLFSLLFLLLLPALSSSIYVGNNILFNHRKIFPKQQELTSYAVIFDAGSTGSRVHVFHFDQNLDLLHIGNEIEFYDKVTPGLSAYADNPENAAKSLLPLLEEAESVVPEHLYPTTPVKLGATAGLRLLDGDASERILQAVSDLLKNRSTFSVQPDAVAIIDGTQEGSYLWVTVNYLLGNLGKNFSKTVGVVDLGGGSVQMTYAVSKNTANNAPQPPEGEEPYIKKLVLKGKKYDLYVHSYLRYGREAFRAEVLKVTDGSANPCILYGFDGTYTYSGEDYKAFAPISGSNYHECRKIALQALKVNQFCPHRNCSFGGIWDGGKGSGQNILFGTSSFYYLPSEIGMFNPNKPNSKIHPLDLKTEAKRACETTFEDAKYTYPLLSADKLPYVCLDLTYQYALFTDGFGLDPLQEITMANQIEYQEALVEAAWPLGTAIEAISSLPKFDPFMYFI 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01625 466 Pfam GDA1/CD39 (nucleoside phosphatase) family 51 456 IPR000407 GO:0016787
Vian2g01625 466 CDD NBD_sugar-kinase_HSP70_actin 58 217 - -
Vian2g01625 466 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 18 456 IPR000407 GO:0016787
Vian2g01625 466 Gene3D - 56 450 - -
Vian2g01625 466 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 175 190 IPR000407 GO:0016787
Vian2g01625 466 Gene3D Exopolyphosphatase. Domain 2 176 434 - -
Vian2g01625 466 FunFam Apyrase 1 176 434 - -
Vian2g01625 466 FunFam Ectonucleoside triphosphate diphosphohydrolase 5 56 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01625 Vian-Chr2 33766610 33769761 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01625 26 455 Calmodulin-binding Proteins AT3G04080 53.132 1.37e-156 451