Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01624 ATGGGGTTTCAATTTTTCTTTAGTTTCTTCCTTTTGTTACTGCCTACATTCTCTTCCTCCGAATATCTTGGGAACAACCTTCTGTCTAATCGGAAAGTATTCCTCAAAGAAGAAGAAAACCTTTCCTCTTATGCTGTGATTTTTGATGCTGGTAGCACTGGAACTCGAGTGCACGTTTTCCATTTCGACCAGAACTTAGATCTCCTTCGCATTGGCAATAATCTTGAATTTCTCGCAAAGGTCACACCCGGTTTGAGTTCATATGCGGATGATCCTGAAAAAGCTGCCCAATCTTTGATTCCACTTTTAGAGGCAGCTGAAAATGTTGTCCCTGAGGACCTGCACCCCAAGACACCCCTTATGCTTGGCGCAACCGCAGGTTTGAGACTTTTGGAAGGGAATGCTGCTGAAAACATATTGCAAGCGGTTAGGAATTTGTTCAAGAACAGAAGTACTCTGAACCTTCAATCAGATGATGCAGTAGCTATAATTGAAGGAACCCGAGAAGGCTCTTATCTGTGGTTGGCTGTGAATTATCTACTGGGGAGGCTGGGAAAAAAGTTTTCAAAGACAGTGGGAGTGGTTGATCTTGGAGGAGGATCAGTTCAAATGGCATATGCTGTCTCAAGGAACACAGCCAAAAATGCCCCATTACTACCTCAAGGAGAGGATCCTTACATAAAGAAGCTATATGCGAAGGGCAAAAATTACGATCTCTATGTTCACAGTTACTTGCGCTATGGTACAGAAGCATTTCGTGCAGAGGTTTTGGAGGTCACTGATGGCTCTGCTAACCCTTGCATTTTGGCTGGATACGAAGGAAGCTATACATATTCAGGAGTGGAGTATGCAGTGTACCCTCCAAAGTCAGGGCCCAGTTATGATGCATGCAGAGAGATAGTCCTTGAGGCTCTCAAACTGAAGGCGCCATGTTCTTATCACAATTGCTCATTTGGTGGGGTATGGGACGGTGGAAGAGGAAGTGGACAAAGAACTATTTATGCTACTTCATCCTTCTATTATCTGCCCAGAGACGTTGGTATCGTTGATCCAAAATCTCCCAATGCCATTGTTCGTCCTGTGGATCTTGAAAACTTGGTTAAGGGAGCTTGTGGAAAAACATTTGAAGATGCCAAATCCAGTTATCCACTTCTTTCTGAAGAAAGAGTTCCGTTTGTGTGCATGGACATTACGTACATGTATGCGTTGCTGATTGATGGATTGGGCCTAGATCCTGAGCAAGAGTTTACACTGGCTGATAAAATTGAATATGAAGATGCTCTTGTGGAAACAGCATGGCCTCTTGGCACAGCCATAGAAGCCATATCATCAGTGCCTAAATTTGAACGGTTTATGTATTTCATGTAA 1368 0.4342 MGFQFFFSFFLLLLPTFSSSEYLGNNLLSNRKVFLKEEENLSSYAVIFDAGSTGTRVHVFHFDQNLDLLRIGNNLEFLAKVTPGLSSYADDPEKAAQSLIPLLEAAENVVPEDLHPKTPLMLGATAGLRLLEGNAAENILQAVRNLFKNRSTLNLQSDDAVAIIEGTREGSYLWLAVNYLLGRLGKKFSKTVGVVDLGGGSVQMAYAVSRNTAKNAPLLPQGEDPYIKKLYAKGKNYDLYVHSYLRYGTEAFRAEVLEVTDGSANPCILAGYEGSYTYSGVEYAVYPPKSGPSYDACREIVLEALKLKAPCSYHNCSFGGVWDGGRGSGQRTIYATSSFYYLPRDVGIVDPKSPNAIVRPVDLENLVKGACGKTFEDAKSSYPLLSEERVPFVCMDITYMYALLIDGLGLDPEQEFTLADKIEYEDALVETAWPLGTAIEAISSVPKFERFMYFM 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01624 455 FunFam Apyrase 1 165 423 - -
Vian2g01624 455 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 16 445 IPR000407 GO:0016787
Vian2g01624 455 Pfam GDA1/CD39 (nucleoside phosphatase) family 38 446 IPR000407 GO:0016787
Vian2g01624 455 CDD NBD_sugar-kinase_HSP70_actin 46 206 - -
Vian2g01624 455 Gene3D - 44 439 - -
Vian2g01624 455 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 164 179 IPR000407 GO:0016787
Vian2g01624 455 Gene3D Exopolyphosphatase. Domain 2 165 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01624 Vian-Chr2 33719245 33722085 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01624 43 444 Calmodulin-binding Proteins AT3G04080 52.109 5.71e-143 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01624 K14641 - gmx:100781628 643.654