Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01615 ATGGGAACCTCTTGCCTAAAATCTGCATCACTTCTTCATGATCTGAAGGTGACAATCCACAAAACTTCAACCATATTTCCATCCAAAGAAATGGAGAACAAGTCCTTGTTCCTAACAAACATAGACAGAGTAGTAAACTTTGATGTGGACACGCTTCACTTCTTCGCAGCAAACAAAGCTTTTTCATTCCAAAAGGTGGCTGAGAAGTTGAAGAAGGCCCTGGAGGATGCTCTTGTGCATTATTCCTTCTTAGCCGGAAGGTTGAGACAGAATCCTGAAACCAAAAGATTAGAGATAGATTGCAACGCAAAAGGTGCTGAGTTTGTAGTGGCTTCAAGTAAGCACAAGTTAACTGAGATTGGAGACTTGGCTTATCCCAATCCAGCTTATGCACAATTGGTTCACAAGAGTAAGGATCTTCCACTATGCGCTGTGCAGCTGACATCCTTTGACTGTGGTGGCTTCGCAATGGGCTTCACAACCAGCCACGTAGCCTTTGACGGACTTAGCTTCAAAACCTTCTTGGACAACCTTGCGGCACTGGCTGCTAATAAGCCCTTGGCTGTGATACCCTGCCACGACAGGCACCTCCTGGCCGCACGATCACCACCACGTGTAACCTTCCCGAACCCCGAGTTGATCGAACTCGATCAGTCACCAACAGGTATTGAGTCCAGCGTCTTTGATGCTTCCAAAGAAGAAGTCGACTTTAGGATTTTGAAACTAACCTCAAAAGACATCCTGAGCCTCAAGGAGAAAGCAAAGGGAAGCACCAACGCCAGCAACACCGGGTTTAACGTTATCACCGCCCATATATGGCGGTGCAAGGCCTTATCAGCACCGTATGACCCTGCTGGATCCTCGACCATACTATTCGCCGTGGACATACGTTCGAAACTGAACCCTCCGTTGCCGGAAGGCTTCGCTGGCAACGCCGTGATAACGGCATTTGCTTCGGCAAAATACGAGGAGTTGGAGAAGGGTGAGTTTTCAAGGTTGGTGGAGATGGTGAAAGAGGGAGCAGAGAGAATGAGTGATGAGTATGTGAGGTCTGTTATAGACCGGGGAGAGCTGGGTGATGGGTTTCCTCGTGGGGATGTTTTGGTGTCTTCGTGGTGGAGATTAGGGTTTGAAAAGGTGGAGTATCCATGGGGGAAGCCAAAGTATTGTTGCCCTCTGGTGCATCATCGGAAGGATATTATTCTGTTGTTTCCTCCCTTTGGCGCAGGTGATATGATGGCTGTTCGATCATTTCTTTGTTTCATAAGAATAGATTGA 1278 0.4757 MGTSCLKSASLLHDLKVTIHKTSTIFPSKEMENKSLFLTNIDRVVNFDVDTLHFFAANKAFSFQKVAEKLKKALEDALVHYSFLAGRLRQNPETKRLEIDCNAKGAEFVVASSKHKLTEIGDLAYPNPAYAQLVHKSKDLPLCAVQLTSFDCGGFAMGFTTSHVAFDGLSFKTFLDNLAALAANKPLAVIPCHDRHLLAARSPPRVTFPNPELIELDQSPTGIESSVFDASKEEVDFRILKLTSKDILSLKEKAKGSTNASNTGFNVITAHIWRCKALSAPYDPAGSSTILFAVDIRSKLNPPLPEGFAGNAVITAFASAKYEELEKGEFSRLVEMVKEGAERMSDEYVRSVIDRGELGDGFPRGDVLVSSWWRLGFEKVEYPWGKPKYCCPLVHHRKDIILLFPPFGAGDMMAVRSFLCFIRID 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01615 425 Gene3D - 11 214 IPR023213 -
Vian2g01615 425 Pfam Transferase family 15 407 - -
Vian2g01615 425 Gene3D - 220 419 IPR023213 -
Vian2g01615 425 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 27 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01615 Vian-Chr2 33496412 33499687 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01615 15 392 Monolignol Biosynthesis Gene Families AT5G48930 30.864 6.65e-49 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01615 K13065 - gmx:100780971 636.721