Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01585 ATGGATCTTCTCTTTCTTCTTCAGTGCCTTCTCTTCTTCACTTCGCAGCACGCAAATGCCCTCAATGCTTCAATTTCTCGCGACGCATTGTCACTTCTCTCTTTTAAAAGCTTCGTCTCTTCCGACCCTTCCAACATCCTCGCCGGTTGGACCAACCACTCCTCCTCCAATATCTGCCGATGGCACTCCGTCGCGTGTGGCGGCCCAGGGAGCCTCTCTGACCGAGTCACTTCCCTCAATGTCACCGGTCTCCGTGGCGGCCTTTTGTCGCCCTCCGTCGGCGACTTGTCTGAGCTCCGCGTGCTGTCCCTCGTCGGGAACATGTTCTCCGGCGAGATTCCTGATACCGTTGGGAACCTTCGGTTTCTCGAGGTCCTCGAACTGCAAGGGAACAACTTTTCAGGGAGAGTCCCGACCCAGATGAGTTTTGCTTTTCTTCAGTCTCTTAAACTTGTTAACCTCTCTGGTAATGCCTTCTCTGGTTCGATTCCGAGTGATATTATTGGCTCTGGGAGTGTGAAAATCGTTGATTTGTCGAATAATCAGTTTTCTGGTGTGATTCCTCTGAATGGTACTTGTGATTCGTTGAAGCATTTGAAGTTGTCTCGTAACTTTTTGACTGGGGAGATTCCATCTCAAATTGGCAAATGTAGAAACTTGAGGACCCTTTTGGTTGATGGGAACATCTTCGAAGGTAGAATCCCTTCTGAGATTGGCCAAATTGTTGAACTGAGAGTTCTGGATGTTTCTAGAAACTCACTCACTGGAAGGGTCCCTAAGGAGTTGGCTAATTGTGTGAAACTGTCTGTGCTTGTGCTTACTGATTTGTTTGAGGATCGTGATGATGGAGGATTGGATGATGGCTTTAGAGGAGAGTTTAATGCCTTTGTTGGGAACATACCTCATCAGGTGTTGCTGCTTCCAAGTCTAACGGTGTTGTGGGCCCCAAGGGCAAATCTTGGTGGACGGTTGCCTAGTGGCTGGTCGGAGTTGTGCTCTCTGAGGGTGCTCAATTTGGTGCAGAATTATGTTACTGGTGTCTTGCCTGAGAGTTTGGGGATGTGTAGGAATTTGAGTTTCTTGGATTTGAGTTCTAATAATTTGGTGGGGTATTTGCCTTCATTGCAGCTTCGTGTTCCTTGTATGGTGTACTTTAATGTCAGCAGAAACAATATATCTGGCACTCTTAAAGGATTTAGGAAAGAAAGTTGCGGTGTGAGTGCAGTAGACCCTTCATTTCTAGAATTGGATGGTTTTAGTGATGATGAATACTTTAATTTACCTGTTTGGAGGTTTCAAAAGAATGCTTTCGTTGGGTCTGGTTTTGAGGAGAATAACACTATTGTTGTTAGCCATGATTTCAGCTGGAATAGTTTTGTGGGATCCTTGCCTTCGTTCTCTCTTGGAGATAGTCTTTTTAGTGCTAATCGTAAAGTCTCCTATGCGCTGTCTCTCAATAATAATAGATTCAGTGGAACTCTACCGGACCAGTTAGTTTCAAACTGTAACGAGCTCAAGACATTGTCAGTTAACTTGAGTGTGAACCAACTATCGGGTGGGAATTTCCAAACGTCGGTTTTGGAGTGCCTAAAGTTGACAGATTTTGAAGCAGCGTACAACCAGATTGATGGGTCAATTGGACCAGCTATAGGTGGCTTGGTGATGCTTCAGCATCTTGATTTAAGTGGGAACAAGCTATCTGGATCACTGCCGAATCAGTTTGGAAACCTTCAAAACATGAAACGGATGCATCTGGGAGGAAACAATCTAACAGGGGAAATTCCTACCCAACTTGGCCAACTGACTTCCCTTACTGTTTTGAATTTGTCTCACAATGCTCTAGTTGGAATAATACCTGCGAGTTTGTCAAATGCCAAAAGTTTTGAAATTCTGTTGGTGGACCACAACAAACTTTCTGGGGAAATACCTTTAACTTTTTCTACTCTTTCCAATCTTGTGCAGCTAGATGTTTCTTTTAACAATCTTTCGGGTCATATTCCTCGTCTTCAACACCCAAGTGACTGTGATTCCTACAAAGGAAATGCACACTTGCATCCTTGCCCTGATCCATATTCTGACTCACCTGCTTCTCTTCCCGTCCCCCTTGAAATCCAGCATCATACTCATAGAGGGAGAAAATTAAGGACATTGGTTATTGTTGTGGTAACTTCTGCTTCTGTGGTACTGTGCACTCTTCTGGGAATAGTATTGGTTATCTTTTCTGGAAGGAGTAAATTTGGTCGGCTTAGCAGTATAAGAAGGCGACAGGTAGTGACCTTTCAAGATGTTCCAACTGAATTGAACTATGACAGTGTGGCCACAGCTACTGGAAACTTCAGCATCAGGCATCTAATTGGCACAGGCGGCTTTGGGTCAACATACAAGGCAGAACTGGCCCCAGGTTTTGTTGTTGCCATAAAGAGGTTGTCGATAGGTAGGTTTCAAGGCATTCAACAGTTTGAAACGGAAATAAGGACACTGGGAAGAATTCGACACAAGAATCTTGTGACTCTTATTGGATATTATGTAGGGAAGGCTGAAATGTTCTTAATTTACAACTACCTTTCTGGAGGGAACCTTGAAGCTTTCATACATGACAGGTCAGGGAAGAATGTTCAGTGGCCAGTTATTTACAAAATAGCAAAAGACATAGCAGAGGCCCTTGCTTTTCTTCACTACTCATGTTCAGCACTGCAAAATGTTACAGGTTCAGCACTGCAAGTCTCTTATAATGATCAGTTGTTTATTGCCACGCCATATGTGAATGCCATTATGATTTTTTTGGCATTTTGGATGGTATCCTTTGGTGACCGCATGGTCCCTTTCGAAGATCCAAAGTTATTTAATGGCACAGAGACGAAGCAATTGTCATCATTGTTCAGAGGACTTCTCTGTCAAAATCTACCGAAAGTTATGCCTGAAATGAAAAAGGATGTTCCTTTTGGGGTCGGGGACGTCTTGGACCGCGGTGGCGATGAGCTGAAGATATTCTACTTCCTCGAGAAGCTAAAGCGTGAAGCGGCACGGAGCGGAGGCAGAATCATCACCATGCACGACAATCACGAAATCATGAACGTTGAGGGCGATTTCCGCTTCGCAACAGAATTCGACATCGAGGAATTTAGGGTTTGGTGGGAGTGGTTCCAAGTTGGGAACAAAATCAATAGCCTTTGCCACGGTTTGGAAAAACCGAACGACCCAATGAGAGGCGTTCCCTCGTCGTTCCGCGGAGTGAGGAAAGAGTTCCATGATGGGTTTCGGGCCCGGGTCGCGGCTTTGCGGCCCAATGGCCCAATTGCAAATAGGTTTCTGTTTGAGAACGTCACCGTTTTGGTCGTTGGGGATTCTATTTTCGTGCACGGGTTGACTGGTCACTTTGCGCCCCGGTATTGTCGGGCCGTAGATAGTGTTCTATGGTTGAGGAAATTCTCGCGTAGCAAGGTGGAGCAATGCGATTGTACCACCCTTGAACATGTTTTGGCCACGGTTCCTGGTGTTAAGAGGATGAATTCTAGGAACATTCCTAAGTGTTTTACAATAGGTAAAGGAAGCTAG 3555 0.4509 MDLLFLLQCLLFFTSQHANALNASISRDALSLLSFKSFVSSDPSNILAGWTNHSSSNICRWHSVACGGPGSLSDRVTSLNVTGLRGGLLSPSVGDLSELRVLSLVGNMFSGEIPDTVGNLRFLEVLELQGNNFSGRVPTQMSFAFLQSLKLVNLSGNAFSGSIPSDIIGSGSVKIVDLSNNQFSGVIPLNGTCDSLKHLKLSRNFLTGEIPSQIGKCRNLRTLLVDGNIFEGRIPSEIGQIVELRVLDVSRNSLTGRVPKELANCVKLSVLVLTDLFEDRDDGGLDDGFRGEFNAFVGNIPHQVLLLPSLTVLWAPRANLGGRLPSGWSELCSLRVLNLVQNYVTGVLPESLGMCRNLSFLDLSSNNLVGYLPSLQLRVPCMVYFNVSRNNISGTLKGFRKESCGVSAVDPSFLELDGFSDDEYFNLPVWRFQKNAFVGSGFEENNTIVVSHDFSWNSFVGSLPSFSLGDSLFSANRKVSYALSLNNNRFSGTLPDQLVSNCNELKTLSVNLSVNQLSGGNFQTSVLECLKLTDFEAAYNQIDGSIGPAIGGLVMLQHLDLSGNKLSGSLPNQFGNLQNMKRMHLGGNNLTGEIPTQLGQLTSLTVLNLSHNALVGIIPASLSNAKSFEILLVDHNKLSGEIPLTFSTLSNLVQLDVSFNNLSGHIPRLQHPSDCDSYKGNAHLHPCPDPYSDSPASLPVPLEIQHHTHRGRKLRTLVIVVVTSASVVLCTLLGIVLVIFSGRSKFGRLSSIRRRQVVTFQDVPTELNYDSVATATGNFSIRHLIGTGGFGSTYKAELAPGFVVAIKRLSIGRFQGIQQFETEIRTLGRIRHKNLVTLIGYYVGKAEMFLIYNYLSGGNLEAFIHDRSGKNVQWPVIYKIAKDIAEALAFLHYSCSALQNVTGSALQVSYNDQLFIATPYVNAIMIFLAFWMVSFGDRMVPFEDPKLFNGTETKQLSSLFRGLLCQNLPKVMPEMKKDVPFGVGDVLDRGGDELKIFYFLEKLKREAARSGGRIITMHDNHEIMNVEGDFRFATEFDIEEFRVWWEWFQVGNKINSLCHGLEKPNDPMRGVPSSFRGVRKEFHDGFRARVAALRPNGPIANRFLFENVTVLVVGDSIFVHGLTGHFAPRYCRAVDSVLWLRKFSRSKVEQCDCTTLEHVLATVPGVKRMNSRNIPKCFTIGKGS 1184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01585 1184 ProSiteProfiles Protein kinase domain profile. 779 1086 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian2g01585 1184 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
Vian2g01585 1184 Pfam Protein tyrosine and serine/threonine kinase 781 892 IPR001245 GO:0004672|GO:0006468
Vian2g01585 1184 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 288 408 - -
Vian2g01585 1184 Gene3D Ribonuclease Inhibitor 425 679 IPR032675 -
Vian2g01585 1184 Gene3D Ribonuclease Inhibitor 86 276 IPR032675 -
Vian2g01585 1184 FunFam Piriformospora indica-insensitive protein 2 188 277 - -
Vian2g01585 1184 Gene3D Ribonuclease Inhibitor 288 408 IPR032675 -
Vian2g01585 1184 ProSitePatterns Protein kinases ATP-binding region signature. 785 807 IPR017441 GO:0005524
Vian2g01585 1184 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 295 896 - -
Vian2g01585 1184 FunFam Nuclear pore complex protein NUP107 25 187 - -
Vian2g01585 1184 Pfam Leucine rich repeat 556 614 IPR001611 GO:0005515
Vian2g01585 1184 SMART LRR_typ_2 241 265 IPR003591 -
Vian2g01585 1184 SMART LRR_typ_2 601 624 IPR003591 -
Vian2g01585 1184 SMART LRR_typ_2 146 170 IPR003591 -
Vian2g01585 1184 SMART LRR_typ_2 96 120 IPR003591 -
Vian2g01585 1184 SMART LRR_typ_2 649 671 IPR003591 -
Vian2g01585 1184 SMART LRR_typ_2 331 354 IPR003591 -
Vian2g01585 1184 SMART LRR_typ_2 553 576 IPR003591 -
Vian2g01585 1184 SUPERFAMILY RNI-like 81 394 - -
Vian2g01585 1184 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 423 695 - -
Vian2g01585 1184 Gene3D Transferase(Phosphotransferase) domain 1 758 919 - -
Vian2g01585 1184 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 743 854 - -
Vian2g01585 1184 SUPERFAMILY Metallo-dependent phosphatases 976 1079 IPR029052 -
Vian2g01585 1184 PRINTS Leucine-rich repeat signature 556 569 - -
Vian2g01585 1184 PRINTS Leucine-rich repeat signature 601 614 - -
Vian2g01585 1184 Pfam Leucine Rich Repeat 195 217 IPR001611 GO:0005515
Vian2g01585 1184 SUPERFAMILY Protein kinase-like (PK-like) 757 895 IPR011009 -
Vian2g01585 1184 Gene3D Ribonuclease Inhibitor 22 85 IPR032675 -
Vian2g01585 1184 SUPERFAMILY L domain-like 297 672 - -
Vian2g01585 1184 Gene3D - 968 1170 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01585 Vian-Chr2 32851852 32860836 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01585 2 895 Receptor kinase-like Gene Family AT3G02130 39.232 4.78e-180 558
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XV Vian2g01585 PK_Tyr_Ser-Thr 1.7e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01585 - - gmx:100795047 1419.45