Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01511 ATGGCTAATGAAAATGGTTTCCAGCTTAGTGTGAAGCTAGGTGAACCAACTCTTGTTCCACCAGCTGAAGAAACAAAGAAGGGTTTGTATTTCCTATCTAACCTTGACCAGAACATTGCAGTGATTGTGAGAACTGTTTATTGCTTTAAAACTTCTGAGAGGGGGAATGAGAAAGCTGGGGAAGTGATAAAGAATGCATTGAAGAAGGTTCTTGTCCACTATTACCCTCTTGCTGGGAGACTCACTATAAGCTCAGAGGGTAAACTCATAGTGGATTGCACAGGGGAAGGTGCCTTGTTTGTAGAGGCTGAAGCAAACTGTTCAATGGAAGAGATTGGTGACATCACAAAGCCAGACCTTGGAACTCTTGGTAAGCTGGTTTATGATATTCCTGGAGCAAAACACATTCTTCAGATGCCTCCTTTGGTTGCTCAGGTGACCAAGTTCAAATGTGGAGGCTTTGCTCTTGGGCTGTGCATGAACCACTGCATGTTTGATGGCATTGGTGCAATGGAGTTTGTGAACTCTTGGGGACAAGTAGCCAGAGATTTGCCACTCTTAATCCCTCCAGTGCTGGACAGAAGCATCCTCAAGGCAAGAAACCCACCAAAGATAGAGCACCTGCATCAAGAATTTGCTGACATAGAAGACAAATCAAACACTTCTAGTTTATACGAAGATGAAATGGTTTACAGGTCCTTCTGTTTTGACCCTGAGAAACTAAAGGAGCTGAAGATGAAAGCAATGCAAGATGGGGCTCTTGATGCATGCACAACATTTGAAGTCCTTTCAGCGTTTGTGTGGATAGCAAGAACCAAGGCACTGAAAATGTTACCTGAGCAACAAACAAAGCTTCTTTTTGCTGTTGATGGAAGGGCCAAGTTCAACCCTCCTCTTTCAAAAGGGTACTTTGGAAATGGAATTGTCCTAACAAATTCTGTGTGTCAAGCTGGGGAACTGACAGAAAAGCCTTTGTCATATGCTGTGGGGCTCATTCAAGATGCTATCAAGATGGTGACAGACAGCTACATGAGATCAGCCATTGATTACTTTGAGGTGACAAGAACAAGGCCTTCCCTTGCTTGCACTCTTCTGATCACAACTTGGTCTAGACTTTCCTTTCACACCACTGATTTTGGATGGGGAGATCCAGTGCTGTCAGGCCCAGTATCACTGCCAGAGAAGGAAGTGATCTTGTTCCTCTCCCATGGCCAAGAGCGAAGAAATATAAATGTGCTTCTGGGTTTGCCTTCTACTGTCATGAAGATTTTCCAAGAATTGATGCAGATATAA 1293 0.4377 MANENGFQLSVKLGEPTLVPPAEETKKGLYFLSNLDQNIAVIVRTVYCFKTSERGNEKAGEVIKNALKKVLVHYYPLAGRLTISSEGKLIVDCTGEGALFVEAEANCSMEEIGDITKPDLGTLGKLVYDIPGAKHILQMPPLVAQVTKFKCGGFALGLCMNHCMFDGIGAMEFVNSWGQVARDLPLLIPPVLDRSILKARNPPKIEHLHQEFADIEDKSNTSSLYEDEMVYRSFCFDPEKLKELKMKAMQDGALDACTTFEVLSAFVWIARTKALKMLPEQQTKLLFAVDGRAKFNPPLSKGYFGNGIVLTNSVCQAGELTEKPLSYAVGLIQDAIKMVTDSYMRSAIDYFEVTRTRPSLACTLLITTWSRLSFHTTDFGWGDPVLSGPVSLPEKEVILFLSHGQERRNINVLLGLPSTVMKIFQELMQI 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01511 430 Gene3D - 212 429 IPR023213 -
Vian2g01511 430 Pfam Transferase family 11 428 - -
Vian2g01511 430 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 17 427 - -
Vian2g01511 430 Gene3D - 6 211 IPR023213 -
Vian2g01511 430 FunFam Tryptamine hydroxycinnamoyl transferase 216 429 - -
Vian2g01511 430 FunFam Spermidine hydroxycinnamoyl transferase 9 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01511 Vian-Chr2 31253199 31254972 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01511 9 428 Monolignol Biosynthesis Gene Families AT5G48930 34.722 2.18e-83 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01511 K15400 - gmx:100804504 809.29