Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01509 ATGATCAATTCACTTTGTGGAACCCTCAAGAGTGAGAACAACTCTAGAACCAAACTCCAAGCCACATCTTCAAATGACTCAAAGAAAAATGCCACTCAATCATCTGGTGATCTTGACCAAACTGGCCTAACCCCACCAAGCTTAAACCTTCCTTCACTAAAATTTGACTTGGATGGAGATGTAGAAGTTCAGTCACCAGATAGTTCAATGTGGGAATCCTTTTTCGCTGACCAACTAGATGCTGATTTCATGATCTCTTCCCCAGTCAGGAACGTTCCCTCTCCGCAACTCTCTTCTTACAATTGCAGCTACAACTATGCTCATGGAATGCAAGGTCAGAGTCTCTCAGGGTGTTCCCCACCAAAGTTTTCATCTTCCCATGTTGGAGCCTTCAACAGCAGCCACAAAGGGAAAGGACTTAGCCCTCTTCACAGGGTCTTCAACTCACCAAACAATCAGTACATGCAGCATGTTGAAAACCTTTCCCTTCCAGCAATAGAAGAGTTCTTGGAAGACTATCAAGGCTATTCATCAACCAAGGTGTCTTCTGACATTGCAACTTCATCTGAATGCTTTGACTTGTCTACTCAAATCCCTTCATCCATATTGGATACCTTAACACTGCCCGATTCCTCAAGGTACCACGGTTCAGTCGATGAAGAATGTGGTGGCTCTTCTCAACTGTACCAAGAGAGTGACATCTATCATCAGATGGGGTCCATGGCTAGTGCTTCCCTCTCACAGGCTCTACAACAAGAACGCTACCAAGAGAAACGGCAAAAGCAGCAAGCACTGCATCAACAACAACAACAACGCCAGCAAGACAGTCTCATGGTGCCTATTCCAATCGGAATCGAGCAGGAGCAAGACAGCGGCCTTCAACTGGTGCACCTGCTTCTGGCCTGCGCAGAGGCTGTGGCGAAAGAGGAATACATGTTAGCAAGAAGGTACCTCCACCACCTCAACCGAGTCGTCACTCCCTTAGGCGACTCCATGCAGCGCGTGGCGGCATGCTTCACCGATTCGCTCAGCGCCAGGCTCAATGCCACCCTCAGCCCGAAACCCTCCAAATCCCTCAGCCCCTCAAACTCCATGGAAGTCCTCAAAATCTACCAGATCGTGTACCAGGCCTGCCCTTACGTCAAGTTCGCCCATTTCACCGCCAACCAGGCCATCTTCGAAGCCTTCGAGACCGAAGAGCGTGTTCACGTCATCGACCTCGACATCCTCCAGGGCTACCAATGGCCCGCCTTCATGCAGGCCCTCGCCGCCCGCCCCACCACCGCTCCCTTCCTCCGCATTACCGGAGTTGGTCCCTCTCTCGACGCCGTCCGCGAAACCGGCCGCTGCCTTACCGAGCTCGCCCACTCCCTGCGCATCCCCTTTGAATTCCACGCCGTCGGAGAACAGCTCGAGGATCTCAAACCCCACATGCTGCACCGCCGTGTGGGGGAGGCTCTCGCTGTAAATGCAGTCAACCGCCTTCATCGCGTCCCCGGGAATCATCTGGGGAACCTTCTCACCATGATACGCGACCAGGCACCGAACATAGTGACCCTGGTGGAGCAAGAGGCGAGCCACAACGGACCCTACTTTCTGGGCCGGTTTCTCGAGGCGTTGCACTACTACTCGGCGATCTTCGACTCGCTGGACGCAACGTTTCCGGCGGATTCGGCGCAGCGGGCGAAGGTGGAGCAGTACATATTCGCGCCGGAGATACGGAACATCGTATCGTGCGAGGGCCCGGAGAGATTTGAGCGGCACGAGAGGCTGGAGAAGTGGCGGAAGATAATGGAAGGAAAGGGGTTCAAGGGCGTGGCACTGAGTCCAAACGCGGTGACTCAGTCGAAAATTTTGCTCGGGTTGTACTCGTGCGAAGGGTATAGGTTGACGGAGGATAAGGGCTGCTTACTGCTTGGGTGGCAGGATAGGGCCATCGTTGCGGCGTCTGCATGGCGGTGTTGA 1965 0.5344 MINSLCGTLKSENNSRTKLQATSSNDSKKNATQSSGDLDQTGLTPPSLNLPSLKFDLDGDVEVQSPDSSMWESFFADQLDADFMISSPVRNVPSPQLSSYNCSYNYAHGMQGQSLSGCSPPKFSSSHVGAFNSSHKGKGLSPLHRVFNSPNNQYMQHVENLSLPAIEEFLEDYQGYSSTKVSSDIATSSECFDLSTQIPSSILDTLTLPDSSRYHGSVDEECGGSSQLYQESDIYHQMGSMASASLSQALQQERYQEKRQKQQALHQQQQQRQQDSLMVPIPIGIEQEQDSGLQLVHLLLACAEAVAKEEYMLARRYLHHLNRVVTPLGDSMQRVAACFTDSLSARLNATLSPKPSKSLSPSNSMEVLKIYQIVYQACPYVKFAHFTANQAIFEAFETEERVHVIDLDILQGYQWPAFMQALAARPTTAPFLRITGVGPSLDAVRETGRCLTELAHSLRIPFEFHAVGEQLEDLKPHMLHRRVGEALAVNAVNRLHRVPGNHLGNLLTMIRDQAPNIVTLVEQEASHNGPYFLGRFLEALHYYSAIFDSLDATFPADSAQRAKVEQYIFAPEIRNIVSCEGPERFERHERLEKWRKIMEGKGFKGVALSPNAVTQSKILLGLYSCEGYRLTEDKGCLLLGWQDRAIVAASAWRC 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01509 654 Coils Coil 252 272 - -
Vian2g01509 654 MobiDBLite consensus disorder prediction 13 49 - -
Vian2g01509 654 Pfam GRAS domain family 295 653 IPR005202 -
Vian2g01509 654 MobiDBLite consensus disorder prediction 13 48 - -
Vian2g01509 654 ProSiteProfiles GRAS family profile. 286 653 IPR005202 -
Vian2g01509 654 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 248 648 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01509 Vian-Chr2 31229955 31232018 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01509 260 654 GRAS Transcription Factor Family AT1G66350 41.895 5.57e-100 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vian2g01509 GRAS 7.4e-131 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01509 - - gmx:100805039 1072.38