Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01487 ATGTTGCCCTGCGATTACTGTCACACCAAACCCGCCTTACTCTTCTGCCGACCCGACTCTGCCAAACTCTGTCTCCTCTGCGACCACCACGTCCACACCGCTAACGCTCTCTCCCTAAAGCACGTCCGCTTCCAGATTTGCGACACCTGCAACACCGACACCGCCACCGTCCGCTGCTCTGCTCACAATCTCATCCTCTGCCACGCCTGCGACCTCGACGCTCACGCCCACGCCCCGGCCTCCCTCCACCACCGCCACCGTCTCCTTGGCCTCTCTGGCTGCCCCTCCCTCCACCAGATTGCCACCGCCCTCGGCCTTGATCTCCGGCTGCGCCACGCCAACTGCCGCGACGAGGTCTACGAGCAGTTCCTCGAAGTCGCGCGCACGAGGAACGAGAACGAGTTTGCGCGTTCAGAGACTGAGGAATTCAGGTTGGAGTCTGAAAATGACGTCGTCGACGAGATGTTGCTGCAGCAGACGCCGTTTACGTCCTTGCTCGGGATGCCTGATTCCCAATCTGAATTCGATGCCGCCAAAACTAACGATAACGGTTACGGAGCCCAAGTTGGAGATCTTCTCTGGACTTTTGATCCCAACTATCAGCCTCCTCAGAACCAATCGGATCAGTCATCATCAAGCCACGCAAAGAAGAAAGAAGAAAGCAACAAGAAAGCCAGAGGTGGGTTATCATCAGAGTCCAAATTGCTAGAATCAATACCGTATAGTGACACCAACAATGTGGTAGTCATGGAGCATCTTGTGGGTGGGAATGCAAATGTTAGCACCTTAAAAGCCAGGGTTAGCGTGGAAGAGTTGGCTAAGAATAGAGGTAATGCAATGTTACGCTACAAGGAGAAGAAGAAATCTCGAAGGTACGATAAACACATTCGCTATGAATCAAGAAAGGCCAGGGCTGATACTAGAAAGAGGGTGAGAGGGAGATTTGTGAAGGCAAGTGATGTTCAAGCAGGATGA 975 0.5344 MLPCDYCHTKPALLFCRPDSAKLCLLCDHHVHTANALSLKHVRFQICDTCNTDTATVRCSAHNLILCHACDLDAHAHAPASLHHRHRLLGLSGCPSLHQIATALGLDLRLRHANCRDEVYEQFLEVARTRNENEFARSETEEFRLESENDVVDEMLLQQTPFTSLLGMPDSQSEFDAAKTNDNGYGAQVGDLLWTFDPNYQPPQNQSDQSSSSHAKKKEESNKKARGGLSSESKLLESIPYSDTNNVVVMEHLVGGNANVSTLKARVSVEELAKNRGNAMLRYKEKKKSRRYDKHIRYESRKARADTRKRVRGRFVKASDVQAG 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01487 324 MobiDBLite consensus disorder prediction 212 227 - -
Vian2g01487 324 Pfam CCT motif 276 318 IPR010402 GO:0005515
Vian2g01487 324 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 3 319 - -
Vian2g01487 324 MobiDBLite consensus disorder prediction 196 231 - -
Vian2g01487 324 CDD Bbox1_BBX-like 3 46 - -
Vian2g01487 324 ProSiteProfiles Zinc finger B-box type profile. 42 91 IPR000315 GO:0008270
Vian2g01487 324 ProSiteProfiles CCT domain profile. 276 318 IPR010402 GO:0005515
Vian2g01487 324 SMART bboxneu5 1 46 IPR000315 GO:0008270
Vian2g01487 324 Coils Coil 126 146 - -
Vian2g01487 324 ProSiteProfiles Zinc finger B-box type profile. 1 46 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01487 Vian-Chr2 30854280 30857671 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01487 1 320 C2C2-CO-like Transcription Factor Family AT2G33500 33.333 1.99e-56 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Vian2g01487 CCT 1.8e-15 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01487 - - vum:124830018 495.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01487 2 30854280 30857671 Vian2g01487 2 30854280 30857671 ECH