Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01480 ATGGCTTTCTCCGACTCTTCTTCGGGCCGCAGCTCTCTCATCCCCTCCTTCCTATACTCCTCGTCCTCCAAGACGCTTCCTCTCCACCGTATGCTCCACTCCACCGCCGCTGCCGCCGCCGCCCCACCCTCGGCACCGCCGGCAAACCTCGATTCTGGATCGCGCGGCTTCATGATTCCCTCTCCCAGCGAGTCACGTAAAATCGAGCTGTACTCTCCCGCCTTCTACGCCGCCTGTACTGCCGGTGGAATCCTCAGCTGTGGCCTCACTCACATGACCGTCACTCCTCTTGACCTTGTCAAGTGTAATATGCAGATCGACCCTGCTAAGTACAAGAACATCACATCTGGATTTGGGGTTTTGCTTAAGGAGCAGGGCTTCAGGGGCTTTTTCCGTGGTTGGGTGCCTACCTTGCTTGGTTACAGTGCCCAGGGTGCTTGCAAATTCGGATTTTACGAGTTCTTTAAGAAGTATTACTCTGATATTGCTGGTCCAGAGTATGCTAGCAAGTACAAGACCTTGATTTACCTTGCTGGTTCCGCTTCTGCCGAGGTTATTGCTGATGTTGCTCTTTGCCCCTTCGAGGCTGTGAAGGTCCGTGTCCAAACACAGCCTGGTTTTGCTAGGGGTTTGGCTGATGGGCTCCCAAAATTTGTGAAATCTGAAGGAACTTTGGGGCTGTACAAGGGAATAGTGCCTCTGTGGGGACGACAAATTCCATACACAATGATGAAGTTTGCTTCGTTTGAGACCATAGTGGAGCTGATCTATAAGCATGCCATTCCTACTCCAAAGAATGAGTGCACCAAAAGCCTGCAACTCGGTGTCAGTTTTGCTGGTGGATATGTTGCTGGTGTGCTTTGTGCAATCGTGTCTCATCCTGCTGATAATCTTGTCTCTTTCCTGAACAATGCTAAAGGAGCAACAGTTGGTGATGCGGTGAGTAAGCTTGGTTTGTGGGGTCTCTTCACCCGTGGTCTTCCCCTCCGTATTGTGATGATTGGAACTCTTACTGGTGCCCAATGGGGAATATATGATGCTTTCAAAGTCTTTGTTGGGCTGCCAACAACTGGTGGTCCTGCTCCTGCCGCCGCTCCAGCTCCAGCTCCTGGTTCTGACCTAGCAAAGGCGTAA 1134 0.5168 MAFSDSSSGRSSLIPSFLYSSSSKTLPLHRMLHSTAAAAAAPPSAPPANLDSGSRGFMIPSPSESRKIELYSPAFYAACTAGGILSCGLTHMTVTPLDLVKCNMQIDPAKYKNITSGFGVLLKEQGFRGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYASKYKTLIYLAGSASAEVIADVALCPFEAVKVRVQTQPGFARGLADGLPKFVKSEGTLGLYKGIVPLWGRQIPYTMMKFASFETIVELIYKHAIPTPKNECTKSLQLGVSFAGGYVAGVLCAIVSHPADNLVSFLNNAKGATVGDAVSKLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGPAPAAAPAPAPGSDLAKA 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01480 377 ProSiteProfiles Solute carrier (Solcar) repeat profile. 171 255 IPR018108 -
Vian2g01480 377 ProSiteProfiles Solute carrier (Solcar) repeat profile. 74 158 IPR018108 -
Vian2g01480 377 Pfam Mitochondrial carrier protein 77 160 IPR018108 -
Vian2g01480 377 Pfam Mitochondrial carrier protein 173 259 IPR018108 -
Vian2g01480 377 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 45 362 IPR044677 GO:0005315|GO:1990547
Vian2g01480 377 Gene3D Mitochondrial carrier domain 74 352 IPR023395 -
Vian2g01480 377 FunFam Phosphate carrier protein, mitochondrial 74 352 - -
Vian2g01480 377 SUPERFAMILY Mitochondrial carrier 77 347 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01480 Vian-Chr2 30697625 30700184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01480 7 377 Chloroplast and Mitochondria Gene Families AT5G14040 76.984 0.0 571
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01480 K15102 - gmx:548006 672.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01480 2 30697625 30700184 Vian2g01480 2 30697625 30700184 ECH
Vian2g01480 2 30697625 30700184 Vian8g00701 8 13619918 13622862 PCT