Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01452 ATGGAAAGTGATGCTGGGGAAAACTTGTTCACCACATTCTTCTCCTCCTCCTCCACATCCATGACCATCTCCACCACCACCACCACCACCACCACCATCACATCATCATCACCATCATCATCTTCATCATCGGCATCTTCTACCTCAAGCTCAAACTCATGCACCAAGCAGGACTCCCAAACAAGTCCTCCAGATGATTCAACAACAGCTCAGAATCAAAACACCCCAAATAAGGAATGCAAGAAAAGACAAAGAAATGGTGATGATAACAAGCACCCCAGTTACAGGGGTGTGAGAATGAGAGCATGGGGCAAATGGGTGTCTGAGATACGTGAGCCTAGAAAGAAGTCGAGAATATGGCTTGGAACATACCCTACAGCAGAAATGGCAGCCAGAGCACACGATGTGGCAGCTTTAGCCATAAAGGGTCACTCGGCTTACCTCAATTTCCCCAATTTAGCTCAAGATCTTCCAAGGCCAATCACCACATCTCCCAAGGACATTCAAGCTGCAGCTGCAAAAGCAGCAACCACTTTCTTTGATGATGGCAAGCGTTGTGAAGCAGAAAAGGATGAACAAAACCATACAGAACAAGCTTCATCTTCAACTCTATGCATGGAGAATACTGAGGTTGAGCAAGTTCAAGCAGAAGAAGCTTCACCTTCAACTCTATCCATGGACACTACTCAAGGGTCTTCAACTTCTCACTCTACTGCAGATGATGACACACTGTTTGACCTTCCAGATCTTTTCCCTGATGGAAACAATGGACTTTTTTTCTCCTATTCTTCTTCTTGGCATTTATGTGCTGCTGATAGTGGATTCAGGCTTGAAGAGCAATTTTTGTGGGAGAATTACTAG 861 0.4506 MESDAGENLFTTFFSSSSTSMTISTTTTTTTTITSSSPSSSSSSASSTSSSNSCTKQDSQTSPPDDSTTAQNQNTPNKECKKRQRNGDDNKHPSYRGVRMRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHSAYLNFPNLAQDLPRPITTSPKDIQAAAAKAATTFFDDGKRCEAEKDEQNHTEQASSSTLCMENTEVEQVQAEEASPSTLSMDTTQGSSTSHSTADDDTLFDLPDLFPDGNNGLFFSYSSSWHLCAADSGFRLEEQFLWENY 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01452 286 MobiDBLite consensus disorder prediction 188 240 - -
Vian2g01452 286 MobiDBLite consensus disorder prediction 197 240 - -
Vian2g01452 286 MobiDBLite consensus disorder prediction 13 96 - -
Vian2g01452 286 Pfam AP2 domain 93 144 IPR001471 GO:0003700|GO:0006355
Vian2g01452 286 CDD AP2 93 153 IPR001471 GO:0003700|GO:0006355
Vian2g01452 286 SUPERFAMILY DNA-binding domain 94 152 IPR016177 GO:0003677
Vian2g01452 286 ProSiteProfiles AP2/ERF domain profile. 94 151 IPR001471 GO:0003700|GO:0006355
Vian2g01452 286 PRINTS Ethylene responsive element binding protein signature 117 133 IPR001471 GO:0003700|GO:0006355
Vian2g01452 286 PRINTS Ethylene responsive element binding protein signature 95 106 IPR001471 GO:0003700|GO:0006355
Vian2g01452 286 FunFam Ethylene-responsive transcription factor 2 93 152 - -
Vian2g01452 286 MobiDBLite consensus disorder prediction 78 96 - -
Vian2g01452 286 MobiDBLite consensus disorder prediction 13 77 - -
Vian2g01452 286 Gene3D AP2/ERF domain 94 152 IPR036955 GO:0003700|GO:0006355
Vian2g01452 286 SMART rav1_2 94 157 IPR001471 GO:0003700|GO:0006355
Vian2g01452 286 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 71 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01452 Vian-Chr2 30291825 30292685 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01452 81 282 AP2-EREBP Transcription Factor Family AT2G44940 55.450 1.01e-69 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Vian2g01452 AP2 1.9e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01452 - - pvu:PHAVU_008G141000g 419.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01452 2 30291825 30292685 Vian2g01452 2 30291825 30292685 ECH