Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01406 ATGATGAGAGAGAGGTACTGTTACAGGGAAGTGCTTCCATTCATTGCAATGGTTGCCATAGAGTGCTCCAACGTTGGTGTGAACATTCTATTCAAAGCTGCAACTCAGAAGGGATTGGGTTATTATGCCTTCATCGCTTATTCATATCTCATCTCTGTTCTCTTTCTCCTTTTGCCTTTGCCCTTCGTCTTTCGATGGTCAAGAGGCCTTCCACAGCTCAACCTCTCTCTCATCTTCAGAATTTTCCTCCTTGGAGTAATCGGAGTGGCAGCTCAACTGTGTGGCTACAAGGGACTGAATTACACATCGCCTACGCTTGCGTCTGCTCTCAGCAACCTCATACCAGCTTTCACCTTCATATTGGCTGTCATTTTCAGGATGGAAAAGGTAGCTTTGAGAAGCTCAAGCACTCAGGCCAAAATCCTGGGTTCGTCCGTATCCATATTAGGTGCACTCATAGTTTTACTCTATAAGGGTTCCATAATCCTTTCAACATCATCTCCAACACTATCTCCTACGCCTCTTTCTCCAATGGGATCTACATCACAAACAAATTGGGTTCTTGGTGGATCCTTACTTGCCATTGAGTATCTTTTGGTTCCAATCTGGTACATTGTTCAGACCAATATTATGAAACAATACCCAGCAGAGTTTATTGTGGTGTTCCTGTACAACCTGAGCGGGACTCTGATATCTGCTCCAATTTGCTTGCTATTAGAAGAAAATTTGAGTGCTTGGAAGATAAATCCTGATATAACATTGATAGCAATTGTGTATTCGGGTTTCTTTTGCACAGGCCTAAGTAGTTTGGTGCACACTTGGGGCATTCATCTTAAAGGCCCAGTTTATGTTTCAATCTTTAAGCCTCTGTCCATTGTGGTTGCAGCCGTTTCGAGTGTCATCTTCCTTGGTGATGCTCTGTATTTTGGAACTGTTGTTGGAGCAGTGATACTCTCGTTTGGATTTTATGCTGTCATATGGGGTAATGCAAAACAAGATGAATTGAGTGAGGACTTTGACATGCGTCCTTCGTCAAGTAGTAAGAGTCCTTTGTTGCTGAGCTACAAAGGGAAAGATAACGAAGAGACCACCCATTGTTGA 1101 0.4305 MMRERYCYREVLPFIAMVAIECSNVGVNILFKAATQKGLGYYAFIAYSYLISVLFLLLPLPFVFRWSRGLPQLNLSLIFRIFLLGVIGVAAQLCGYKGLNYTSPTLASALSNLIPAFTFILAVIFRMEKVALRSSSTQAKILGSSVSILGALIVLLYKGSIILSTSSPTLSPTPLSPMGSTSQTNWVLGGSLLAIEYLLVPIWYIVQTNIMKQYPAEFIVVFLYNLSGTLISAPICLLLEENLSAWKINPDITLIAIVYSGFFCTGLSSLVHTWGIHLKGPVYVSIFKPLSIVVAAVSSVIFLGDALYFGTVVGAVILSFGFYAVIWGNAKQDELSEDFDMRPSSSSKSPLLLSYKGKDNEETTHC 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01406 366 PANTHER WAT1-RELATED PROTEIN 12 341 IPR030184 GO:0016020|GO:0022857
Vian2g01406 366 MobiDBLite consensus disorder prediction 341 366 - -
Vian2g01406 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 158 - -
Vian2g01406 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 235 331 - -
Vian2g01406 366 Pfam EamA-like transporter family 202 326 IPR000620 GO:0016020
Vian2g01406 366 Pfam EamA-like transporter family 26 155 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01406 Vian-Chr2 28966322 28973661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01406 2 360 Nodulin-like Gene Family AT5G40240 53.117 1.72e-133 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01406 - - gmx:100805667 552.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01406 2 28966322 28973661 Vian2g01406 2 28966322 28973661 ECH
Vian10g01153 10 18870998 18873558 Vian2g01406 2 28966322 28973661 ECH
Vian4g01553 4 30788689 30792138 Vian2g01406 2 28966322 28973661 ECH