Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01395 ATGTCCAAGATTCGCGGATTCAACCTCAGGAAGCGCCTCATCCGGGTCTCCAAATGGGTCTTCAGGAAGATCCGGGTCCGGACTAGACCCGGATACCATCGCCTGGGCAACTCTCCTCGGTCGTCCATCGCTAAACTCCTCTCGTGGGGTCGCAAACTGACGGCGAGCGCCAAGTCCTGCTTGCCGGTATCAGTAGGGTCCGGTTACGCTCAATTGGGATCCGGTTCCGTGGTAGGATCCGACCGGGACCCGAGTGTGCCCAAGGGACATCTGGCCGTGTACGTGGGGCAGAAGGATGGCGAGTTGCACCGCGTTCTGGTCCCGGTAATATACTTCAACCATCCTTTGTTTGGGGAGTTGCTGAAGGAGACAGAGGAGGAGTTCGGGTTCCACCACGACGGGGGAATCACCATCCCGTGCCGGTTCACTGAGTTTGAACGGGTCAAGACCCGAATAGCTTCCGGGTCTCGTCGGAGCACCCGTCCCAAAAGGTTGGCCTGA 501 0.5888 MSKIRGFNLRKRLIRVSKWVFRKIRVRTRPGYHRLGNSPRSSIAKLLSWGRKLTASAKSCLPVSVGSGYAQLGSGSVVGSDRDPSVPKGHLAVYVGQKDGELHRVLVPVIYFNHPLFGELLKETEEEFGFHHDGGITIPCRFTEFERVKTRIASGSRRSTRPKRLA 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01395 166 Pfam Auxin responsive protein 78 149 IPR003676 GO:0009733
Vian2g01395 166 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 64 147 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01395 Vian-Chr2 28730473 28730973 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01395 84 160 Calmodulin-binding Proteins AT3G43120 44.156 1.52e-16 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01395 K14488 - gmx:100783436 267.314