Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01394 ATGGCAGTGATCCTGTTGAAGAAGCAGAGAGGCAAACGGAAGCCATCAAGGTCACCGGGTCCAAGAGGTCTTCCCCTCATTGGCAATCTTCACCAAATTGATAGTTCAAAATTGAATATCCAGCTGGAGCAGCTCTCAAAGGTCTATGGTCCCCTTTTCTCCCTCCAATTAGGCTTCAAGCAAGCCATTGTTGTTTCCTCTCCAAAACTAGCCAAGGAAATCCTCAAAGACCATGACATTGATGTCTGCACCAGGCCTCCCTCTCTTGGCCCTCTAAAACTCTCATACAACGGCCAAGAGATGATTTTCTCTCCCTTCAACGACTACTGGAGAGAAATTAGAAAAATCTGTGTGGTCCATTTCTTCAGCTCCAAACGGATCTCCACCTTTTCCAGTGTGAGAAAATCTGAAGTCAAACAGATGATGGAAATTTTATCTGGGCATGTTCGTTCTTCCAAAGTAACCAACTTGAGTGAGCTCATGATGTCGGTCTCAAGCGGCATCATTTGTAGGGTTGCATTTGGGAAAAAGTACGATGAAGAAGGAGCTGAGAGAAGCAGGTTCCATGGGCTTCTAAACGACTCACAGGCTATGTTCCTTTCTTTCTTTGTCTCGGATTACATTCCGTTCTTGGGGTGGATCGATAAACTCACTGGCTTGTTTGGCCGTCTGGAAAACACTTTCAAGGCCTTGGATGTTTTCTTCCAAGAAGTCATTGACGACCACCTAGATCCGAACAGGGTCAAACAAAATGAAGACGAGGATATTGTCGATGTGCTGCTTGAGCTTAAGAAGCAGGGTCGCTTGTCAATAGACCTCACCCAAGATCAAATCAAAGCTATCATCTTGGACATACTTGTGGCAGGGACTGACACAACTGCAGCCACATCCGTGTGGGTAATGACCGGATTGATGAAGAACCCAAGAGCAATGGCGAAAGCCCAAGAAGAAATTCGAAATGCGTGTGGCAAGAAGGAGTTCATAGAGGAAGAGGATGTTGAAAAGCTTGAATATCTGCAGGCAGTAATAAAAGAGACACTTAGGTTTTATGCACCAACACCACTGGTACCAAGAGAAGCCATTAGAAGTTTCAGCATAGATGGGTATGAAATAGAAGCGAAGACAATAGTGTATGTGAACGGGTGGGCCATTCAGAGGGACCCTGAAGCTTGGAAAGACCCAGAAGAATATTGGCCAGAGAGGTTTTTGAACAGTGAGATAGATTTTAAGGGACATGATTTTGAGTTTATTCCGTTCGGTGCAGGGCGTAGAATTTGCCCTGGCATATCGCTGGGAATTGCATCAGTGGAGCTCATAACTGCAAATCTTCTTAATTCATTCCACTGGGAGTTGCCCGAAGGGATGAAACCTCAAGACATAGACACTGAGGGTCTGCCAGGCCTTGCCCGACACAAGAAGAATCATCTTTTCGCTTTTGCCAAAAAACGTATTTGA 1455 0.4522 MAVILLKKQRGKRKPSRSPGPRGLPLIGNLHQIDSSKLNIQLEQLSKVYGPLFSLQLGFKQAIVVSSPKLAKEILKDHDIDVCTRPPSLGPLKLSYNGQEMIFSPFNDYWREIRKICVVHFFSSKRISTFSSVRKSEVKQMMEILSGHVRSSKVTNLSELMMSVSSGIICRVAFGKKYDEEGAERSRFHGLLNDSQAMFLSFFVSDYIPFLGWIDKLTGLFGRLENTFKALDVFFQEVIDDHLDPNRVKQNEDEDIVDVLLELKKQGRLSIDLTQDQIKAIILDILVAGTDTTAATSVWVMTGLMKNPRAMAKAQEEIRNACGKKEFIEEEDVEKLEYLQAVIKETLRFYAPTPLVPREAIRSFSIDGYEIEAKTIVYVNGWAIQRDPEAWKDPEEYWPERFLNSEIDFKGHDFEFIPFGAGRRICPGISLGIASVELITANLLNSFHWELPEGMKPQDIDTEGLPGLARHKKNHLFAFAKKRI 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01394 484 PANTHER CYTOCHROME P450 71B11-RELATED 11 480 - -
Vian2g01394 484 Gene3D Cytochrome P450 2 481 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g01394 484 Pfam Cytochrome P450 19 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g01394 484 PRINTS E-class P450 group I signature 426 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g01394 484 PRINTS E-class P450 group I signature 340 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g01394 484 PRINTS E-class P450 group I signature 164 182 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g01394 484 PRINTS E-class P450 group I signature 46 65 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g01394 484 PRINTS E-class P450 group I signature 277 294 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g01394 484 PRINTS E-class P450 group I signature 297 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g01394 484 PRINTS E-class P450 group I signature 70 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g01394 484 PRINTS E-class P450 group I signature 416 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g01394 484 PRINTS E-class P450 group I signature 380 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g01394 484 FunFam Cytochrome P450 83B1 4 479 - -
Vian2g01394 484 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 419 428 IPR017972 GO:0005506|GO:0016705
Vian2g01394 484 PRINTS P450 superfamily signature 341 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g01394 484 PRINTS P450 superfamily signature 417 426 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g01394 484 PRINTS P450 superfamily signature 288 305 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g01394 484 Coils Coil 311 331 - -
Vian2g01394 484 SUPERFAMILY Cytochrome P450 19 483 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g01394 484 CDD CYP71-like 49 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01394 Vian-Chr2 28700450 28702046 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01394 2 484 Cytochrome P450 AT4G31500 47.035 6.52e-161 463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01394 - - gmx:100806470 803.512