Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01392 ATGTCACCCGTGCAGTTCGTTTCTTCCTCCTCTCATGCTCCTCCTTGGCTTCAACTCCTCCTCACCGAGAAGTTCTACAACGCTTGCATAATTCACGAGGAGGCAAAGAAGAACGAGAAGAACGTCTATTGCTTGGATTGTTGCATCAGTCTCTGCCCTCACTGTTTGTCCCCTCACCGCTCTCATAGACTCTTGCAGATTAGAAGATATGTGTATCATGATGTTATAAGGTTGGATGACGCTGCAAAATTAATTGACTGCACTTCAGTTCAATCCTACACGACCAACAGTGCAAAAGTGGTATTTTTAAACCAAAGGCCACAGGCAAGGAACTTCAGAGGCTCCGGCAATTTCTGCAGCACCTGTGACAGAAGTCTGCAAGACCCATACCATTTCTGCTCCCTTTCTTGCAAGATCAATTATCTGGTCAGAACTAAGGGTTCTCTCTCTGGTTACCTCTTCGAGTGCAACTACTTGCCGCTACCGGAATGTGGGCTCGACGATGGTCTGATGACCCCTGACTCGGTTCTGGAACCGGCCGGTTCGGCTAGAACCTCGTCAGGCTCCGGAGGGTATGGTGGGGTGGATTGCAGGACCACCCTGGCTTGCACTGCAACCACTGAGATTGTGAGGAAGAAGAGAACCGGAGGCTCTGGTTTCCGACCACCGTGCCGACCGGCGTGTTCGCCTGTGTCGGAAATCTCGGCGGGCCTGATGAATCGGAGGAAAGGGAACCCCCAGAGGTCCCCGCTGTACTGA 759 0.5178 MSPVQFVSSSSHAPPWLQLLLTEKFYNACIIHEEAKKNEKNVYCLDCCISLCPHCLSPHRSHRLLQIRRYVYHDVIRLDDAAKLIDCTSVQSYTTNSAKVVFLNQRPQARNFRGSGNFCSTCDRSLQDPYHFCSLSCKINYLVRTKGSLSGYLFECNYLPLPECGLDDGLMTPDSVLEPAGSARTSSGSGGYGGVDCRTTLACTATTEIVRKKRTGGSGFRPPCRPACSPVSEISAGLMNRRKGNPQRSPLY 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01392 252 ProSiteProfiles Zinc finger B-box type profile. 24 67 IPR000315 GO:0008270
Vian2g01392 252 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 11 251 - -
Vian2g01392 252 Pfam PLATZ transcription factor 68 139 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01392 Vian-Chr2 28668448 28669930 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Vian2g01392 PLATZ 2.8e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01392 - - pvu:PHAVU_008G142900g 495.352