Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01357 ATGGTCGTGGGTTCCTGCACACTAACTTCTAATACGAAGAGAAGGGCCACCTACAAATTTTCCACCGACATGGACACTGAAGCTGCCACCAAGATCAAGCTTGATGCATTGAAAGAAAGAGCTGGGCGAGAGATCCGTGTTTTTGAAACATATGTTTCCTCATCATCAAATTCTGCATTATCCAATGAAGAGGTGACTGATGACTTCTATGAGTTTACTGCTGAAGATTATCACAGACTTTTGGCAGCTAAAAAGGAAGATAAGTTCTTGAAGACTCGAAAAATCCGAGAAGCAGAAGAGGCAGCACGGAGGTCAGAAATGACCAAGGCTATAATTAGAGTTCGATTCCCAGATAATCACACATTGGAGACTACATTCCACCCATCGGAAACAGTCCAGAGTTTAATTGATGTCCTGACTAAAGTTATTGTGCTGCCAGAGCAGCCATTCTATATATATACTACTCCGCCTAAAAAGATTATGAAAGACATGTCTCAGAATTTTTATGATGCTGGCTTTTGTCCTGGTGCCATTGTCTACTTCTCATACGATGTCCCAAAAGGTAACACTGGTCCTTACCTTCAAGAAGATATCTTGTCTTTGAAGGAACTGCATGCTGCTAATGATCAAGGCCAACAATCTGAGCCTTTAGTACAGTCAGAACCTGAACCTGCTGTGGCAACACATCCTCCTCCTGTTGAACAACGAAAACCTGCTGAAAAAAAACTTGTTAAACCAAAGTGGTTAAAAATGTGA 756 0.4153 MVVGSCTLTSNTKRRATYKFSTDMDTEAATKIKLDALKERAGREIRVFETYVSSSSNSALSNEEVTDDFYEFTAEDYHRLLAAKKEDKFLKTRKIREAEEAARRSEMTKAIIRVRFPDNHTLETTFHPSETVQSLIDVLTKVIVLPEQPFYIYTTPPKKIMKDMSQNFYDAGFCPGAIVYFSYDVPKGNTGPYLQEDILSLKELHAANDQGQQSEPLVQSEPEPAVATHPPPVEQRKPAEKKLVKPKWLKM 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01357 251 SUPERFAMILY Ubiquitin-like 83 181 IPR029071 -
Vian2g01357 251 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 1 5 251 IPR044232 GO:0032984|GO:0051117
Vian2g01357 251 ProSiteProfiles UBX domain profile. 105 181 IPR001012 GO:0005515
Vian2g01357 251 CDD UBX2_UBXN9 110 183 - -
Vian2g01357 251 MobiDBLite consensus disorder prediction 208 251 - -
Vian2g01357 251 Gene3D - 99 181 - -
Vian2g01357 251 MobiDBLite consensus disorder prediction 234 251 - -
Vian2g01357 251 Pfam UBX domain 108 177 IPR001012 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01357 43 138 C2H2 Transcription Factor Family AT2G01650 36.000 9.47e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01357 K15627 - gmx:100818386 365.54