Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01348 ATGTGCAACAAGAACAGTCCTTCTTCTCCAAACATTCAAACAACCTCTATTATGAAGAGGACTCGGAAACCGACGAAACGGTATCACTCTTCTTCCTCCTCCTCTTCGTCTTCTTCCTCGCTTAAGCCGCACCGGCGCGGGAACCGGACCAAGACGCGGAGGCCCAAGTTCGTCAGCTTACGTCTTCAGCTATCCGAGCCCAAGAACATGGGGTCCCAGCCCAAGCCCAAGCCCAAGGCCCTACAGCAGCCGCAGCTCAACCTCTTCCCTCTGCATCCGGAGCACCATGACATGCAGGAGGAGCAGAACGTGGCTCTGCTCTTCAGCGCGGAGGGCGGGGCAACGCTGACGGGGCTGCTAGAGGAGGATTCGATGTCGCCGTCCTCGGCGACTACAGAGGGGTCGCTGTCGGCGCGTACGTGTCCGGAGGAGGACGCCGGGAATTGGCTAGTGAGGAAGGCGATGCGGCGGAGGGAGAGCGAGGAGGGGAGCGAGGAACGGTGGGTGTGCTATTCGGAGGTGGTGGAGGAGAAGAAGGAGACGATGGAGGAGGTGACGAGTTATTGCATGATGGGGACAACGACGACGACGGCGATGACAACGTCCTTTGGATTGTTGTCCTTGAAGCTGGATCACCAGGGGATATTGAATGCTTGGTCTGATAAAGGCTCGCTATACGTCGCGGGGGAGGGAGGTCCACACATTGTCCCTGACTTCCTCAATGGTTTCCTCCTTCATAATGCGTTCCTCCCCCATGTTGCATGGGATGGTTGGGGGAATGGTGTGGTTGGGAACACATGGAATGTTACTGAAGATTGTGGGGGTAACAAGACGAATGTGAAGGAAGAAAACGGTTGGAAGTTGGGGCAGAGAGAGGCAAGTGTTCAGAGATACAAAGAGAAGAGGCAAAGCCGACTCTTCTCTAAGAAGATCCGTTATGAAGTTCGCAAGCTCAATGCTGAGAAACGGCCCAGGATGAAGTTACACGGTGGGACGATTTGTGAAGAGGGAATGAGAAGTGCAGAAGGATTGGGACGGTTGATAATAAGAATGTTGTGTGATATTACAGCGTTGGAAGAATTTTTCATGTCTTTGGTTTTGGGTAGTGCTGGGATGCTTTCTTGGTGA 1128 0.539 MCNKNSPSSPNIQTTSIMKRTRKPTKRYHSSSSSSSSSSSLKPHRRGNRTKTRRPKFVSLRLQLSEPKNMGSQPKPKPKALQQPQLNLFPLHPEHHDMQEEQNVALLFSAEGGATLTGLLEEDSMSPSSATTEGSLSARTCPEEDAGNWLVRKAMRRRESEEGSEERWVCYSEVVEEKKETMEEVTSYCMMGTTTTTAMTTSFGLLSLKLDHQGILNAWSDKGSLYVAGEGGPHIVPDFLNGFLLHNAFLPHVAWDGWGNGVVGNTWNVTEDCGGNKTNVKEENGWKLGQREASVQRYKEKRQSRLFSKKIRYEVRKLNAEKRPRMKLHGGTICEEGMRSAEGLGRLIIRMLCDITALEEFFMSLVLGSAGMLSW 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01348 375 MobiDBLite consensus disorder prediction 65 80 - -
Vian2g01348 375 ProSiteProfiles CCT domain profile. 291 333 IPR010402 GO:0005515
Vian2g01348 375 MobiDBLite consensus disorder prediction 1 80 - -
Vian2g01348 375 MobiDBLite consensus disorder prediction 28 43 - -
Vian2g01348 375 Pfam CCT motif 291 327 IPR010402 GO:0005515
Vian2g01348 375 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 15 327 - -
Vian2g01348 375 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01348 Vian-Chr2 27807952 27810322 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01348 206 327 C2C2-CO-like Transcription Factor Family AT1G73870 44.262 8.69e-19 85.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vian2g01348 CCT 4.5e-14 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01348 - - gmx:100798231 453.751