Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01311 ATGAGTAAGATGGATATGTCTCCAGGGGGAAACATGCCTCTAATGCCTAATGGCACAAGCAATATGCACTATTACATGATGCAGATGAGTTTCTACTGGGGCAAAGATGCCACAGTGCTTTTCCATGGTTGGCCTGGTAACAGTGTTGGCATGTACATCTTGGCCATCATATTTGTGCTTTTGTTAGCCATGGCTATTGAGGTTTTATCAAACCAACCACTCATTAAACCAGGGACAAGTCCCCTTGTGGGAGCACTCATGCAAGGTTTTGTTCAGTTTTTTCGCATCAGCTTCGTTTACATGGTGATGCTTGCTGTCATGTCATTCAATGGGGGAATATTCATAGCTGCTGTGATCGGCCACACCTCGGGGTTCTTCATAGCCAAATCTCGTGCTCTTGCTCTCGTCAATAAGGAAGAAGACAAAGGGTCTTCCTCGGTTAGGAACAATGTTTGA 456 0.4496 MSKMDMSPGGNMPLMPNGTSNMHYYMMQMSFYWGKDATVLFHGWPGNSVGMYILAIIFVLLLAMAIEVLSNQPLIKPGTSPLVGALMQGFVQFFRISFVYMVMLAVMSFNGGIFIAAVIGHTSGFFIAKSRALALVNKEEDKGSSSVRNNV 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01311 151 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 18 141 IPR007274 GO:0005375|GO:0016020|GO:0035434
Vian2g01311 151 Pfam Ctr copper transporter family 86 127 IPR007274 GO:0005375|GO:0016020|GO:0035434
Vian2g01311 151 Pfam Ctr copper transporter family 29 70 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01311 Vian-Chr2 27092300 27092755 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01311 21 133 Inorganic Solute Cotransporters AT5G59040 45.133 2.38e-27 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01311 K14686 - gmx:100813144 203.756
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01311 2 27092300 27092755 Vian2g01311 2 27092300 27092755 ECH