Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01303 ATGGGTTCAAGTCAGGAAGAAGTGACCCTTCTGGGAGCTAGTGGAAGCCCATTTGTTTGCAGGGTGAAGATAGCCCTGAAGTTGAAGGACGTTGAATACAAATACGTGGAAGAAAATTTGGGCAACAAGAGTGAACAGCTTCTGAAATACAACCCAGTTCACAAGAAGGTTCCAGTTCTTGTTCACGGTGAGAAACCCCTTGCAGAGTCTCTTGTGATTGTTGAGTACATCGATGAGACATGGAACAACAATCCCATCTTGCCTTCCGATCCTTACCAGAGAGCCTTGGCTCGTTTCTGGTCCAAATTCATCGATGACAAGATTGTGGGTGCTTCGTGGAAATCTGTTTTCACGGTTGATGAGAAAGAGCGTGAGAAGAATGTTGCAGAAGCATATGAGAGTCTGCAGTTTCTTGAGAACGAGATAAAGGAGAAGAAGTTCTTCGGAGGAGAGGAGCTTGGGTTGGTAGATATTGCTGCTGTCTATGTAGCATTTTGGATCCCTTTGATTCAAGAAATAGCAGGGTTGGAGTTATTGACAAGTGAGAAATTTCCTAATCTCTACAGGTGGGGCCAAGAATTTGTGAACCATCCAATTGTGAAAGAAAGTCTTCCCCCTAGAGTCCCAGTTTTTGGCTTTTTTAAAGGACGCTATGAAGGCCTTTTTGCTTCAAAATAG 678 0.4381 MGSSQEEVTLLGASGSPFVCRVKIALKLKDVEYKYVEENLGNKSEQLLKYNPVHKKVPVLVHGEKPLAESLVIVEYIDETWNNNPILPSDPYQRALARFWSKFIDDKIVGASWKSVFTVDEKEREKNVAEAYESLQFLENEIKEKKFFGGEELGLVDIAAVYVAFWIPLIQEIAGLELLTSEKFPNLYRWGQEFVNHPIVKESLPPRVPVFGFFKGRYEGLFASK 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01303 225 Coils Coil 121 141 - -
Vian2g01303 225 CDD GST_C_Tau 91 217 IPR045074 GO:0004364|GO:0006749
Vian2g01303 225 Gene3D - 90 225 - -
Vian2g01303 225 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Vian2g01303 225 SUPERFAMILY GST C-terminal domain-like 79 219 IPR036282 -
Vian2g01303 225 CDD GST_N_Tau 8 81 - -
Vian2g01303 225 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 222 IPR010987 -
Vian2g01303 225 Gene3D Glutaredoxin 1 89 - -
Vian2g01303 225 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 11 206 IPR045073 -
Vian2g01303 225 Pfam Glutathione S-transferase, C-terminal domain 106 198 IPR004046 -
Vian2g01303 225 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Vian2g01303 225 FunFam Glutathione S-transferase GSTU6 3 87 - -
Vian2g01303 225 SUPERFAMILY Thioredoxin-like 8 108 IPR036249 -
Vian2g01303 225 FunFam Tau class glutathione S-transferase 87 224 - -
Vian2g01303 225 SFLD Glutathione Transferase (cytosolic) 5 220 IPR040079 -
Vian2g01303 225 SFLD Main.3: Omega- and Tau-like 5 220 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01303 Vian-Chr2 26888861 26889858 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01303 3 218 Glutathione S-transferase Gene Family AT3G09270 50.459 8.28e-76 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01303 K00799 - gmx:100500052 382.874