Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01297 ATGAAGATTCAGTGCAATGTTTGTGAGGCTACGGAGGCCAAGGTTCTGTTTTATGCTGATGAGGCTGCTTTGTGTTGGGAGTGTGATGAAAAGGTTAATGCGGCTAACAAGCTTGCCAGCAAGCACCAGAGAGTTCCTCTTTCTACCTCTTCCTCTCATATGCCCAAATGTGACATTTGCCAGGTTTATGTGGGGATTGCAATTGCTGTGGTAACCGACGAAAAAAGGTTGGACGTTCACGAGCTTGGAGTGGCCAGAGGGGGAGTGACGGATGTGGCCAACACCGTTGGTTGA 294 0.4898 MKIQCNVCEATEAKVLFYADEAALCWECDEKVNAANKLASKHQRVPLSTSSSHMPKCDICQVYVGIAIAVVTDEKRLDVHELGVARGGVTDVANTVG 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01297 97 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 63 - -
Vian2g01297 97 CDD Bbox1_BBX-like 5 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01297 Vian-Chr2 26792442 26792878 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01297 1 66 C2C2-CO-like Transcription Factor Family AT1G78600 75.758 3.17e-29 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01297 - - gmx:100790959 122.864