Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01295 ATGAATCTTGAAGTGAACGGTGAAGAGGGTGATGAGAAGAAATGGGTTCATGATTCTTCAGTGGACCACAAAGGCAAGGTTCCACTTCGAGCTTCAACTGGTTCTTGGAAAGCTGCTTTCTTCATTATTGCAATTGAGACCAGCGAGAGGTTGAGCTTCTTTGGAATAGCCACTAGTTTGGTCCTTTACCTCACAAAGGTTATGCATCATGACCTAAAAACAGCAGCAAGAAATGTGAACTACTGGTCGGGTGTCACAACTTTGATGCCACTGTTTGGTGGATTCATAGCTGATTCATACATGGGCCGTTACACCACTGTTCTGGCATCAAGCATTTTCTATCTAATGGGTTTGATTCTCCTTACTTTGTCTTGGTTCCTGCCAAGCTTAAAACCATGTGATGACACAGGCTTATGCACCAAACCAAGGAGAATTCATGAAGTGGTTTTCTTCCTGGCCATTTACTTAATATCCTTTGGAACTGGAGGGCACAAACCGTCCTTGGAGAGCTTTGGAGCTGACCAATTTGATGAGGATCATGATGAAGAAAGGAGGCAAAAAATGTCCTTTTTCAATTGGTGGAACTGTGCACTATGCACTGGACTTATTGTAGGAGTGACCCTCATTGTTTACATACAAGACAACATAAGCTGGGGAGCTGCTGATATTATCTTCACAGTGGTCATGGTTTTTTCACTGATCATCTTCGTATTGGGAAGGACATTTTATCGTTATAGGGTACCCACTGGGAGTCCCTTGACTCCAATGTTGCAGGTTCTTGTTGCTTCCTTTTCCAAAAGAAAGCTTCCACACCCTTCTGATCCTGCTCAATTGTATGAGGTTCCAAAATCTATTGGCATCAACAAAAGATTTCTGTGTCACACTAACAAACTGAAATTTCTTGACAAGGCAGCGATTCTTGTCAATGATGGAAGTTTAGCAGAGAAGCAGAGTCCTTGGAATTTATCAACTGTAACAAAGGTCGAAGAAACGAAGCTTATTATCAACATGATTCCTATTTGGGTATCTACCATACCATTCGGAATATGTGTGGCACAAACTGCTACATTCTTCGTGAAACAAGGTACCACATTGAACAGAAAGATAGGTAACGGGTTTGAGATTCCTCCAGCTTCAATCTTCACGGTTTCTGCGTTGGGAATGGTAGTTTCTGTGGCGATATATGACAAGATTCTTGTGCCTGTGTTACGAAGAGTGACACAGAATGAGAGAGGAATCAACATTCTTCAGAGGATTGGTTTTGGAATGCTGTTCTGTATTGCTGCAATGATAGCAGCAGCTTTGGTGGAGAGAAAGAGGCTTGAAGCTGTTGAGAGGGATCCCTTGAAGGGTTCACTGACAATGAGTATATTCTGGTTGGCACCACAGTTTCTCATCATTGGTTTTGGAGATGGATTTACTCTTGTGGGTTTGCAAGAGTACTTTTATGACCAAGTTCCTGACTCAATGAGAAGCCTGGGCATAGCATTTTACCTTAGTGTAATGGGTGCAGCAAGTTTCCTAAGTAGCATGCTTATAACAGTAGTTGACCACATGACAGAGAAGAGTGGCAGCAAGAGTTGGTTTGGGAAGGATTTGAATAGTAGTCGATTGGACAAGTTCTATTGGCTATTGGCAGCCATGAGCACACTCAATTTATTCTTGTTTGCGTTTCTTGCCAGTCGATTTTCCTACAAAAGGGTGCAAAAGGTAGCTGTGGCTGATTGCTATGAAGACAAAAGTGATTATGAGAGTGTGGAAACCAAGAATGGTGAAGAGAAAACGTTGGGGGTGTGTACTGGTCCTGGTGCGATGAATGGGGAGAACGATGAGGGAGACGAAGAGGGTAAAATTGGAATATATGATTTTAGTGGGGTGCAGGAAGAAAAGTTGCCCCACTCTCGTTGTTGTCTCCGTCGCTGGCTCAACCTCTGGGCGCCATGGTCGCCACTTCTCCTTGTCTCCATGCCACGCCGCAGCACCATTGTCGTTGTCGCCATTGCTCTAGCCTCCCCGACGCGCCGTTGCACCACTACCGTTGTCGCCACTACTCTAGCCTCCCCGACGCACCGCTGCAACATTGCCACTGCCACCGTCGCCACTGCCAGTCACCATCACTTCCACTATTCTTCTCTGCAACTTCCGTCACCTCTTCTGCTCCACTCGCTTTCCCTCTTCTCCTTCTTCATCTGCAACATCATCACCAACTACACCAACCCCTCTCTTTTTAACTTTCTTTTCTTTTCTATGGCTGAGGGTTTTGAGCACTACCATGTCCCACAACAAAGTAGGAGGGACAAGCTAAGAGTTTTCCCTCAGAACCACCCTTCTTTCCTTGAATCTTCCTCTATCCTTCTCCCCACTTCTCCAAATTTAACCTCTCTCTACGATCCTTCTCTTCTTCCCTCTGATTTCTTGGCTTGTGCCACCCAACAACCTCCCGCTGCTAAGGGAGAAGGTTCCAATTTGATGATGGGGTTTCTCGAAGGAGGGGTTGTCAATGGTGATGCAATTCATGTTATCAACAGTAATACCAACCACCACCACAACAACCCTTTTCTCTATCAGCTTCAGAACCTTAGGGAATTTGGTGATGGCTACAATGATGCGAGTGAAATGATGGTGTTCAAGCCCGAGCCTTTGTCTTTGTCTTTGTCTTCCCAGAGTAACAACACTCATCACCCTCTGGAACTGAATCTTCAGCGATTTGGGGCTGTTATTCCTGGTTTGGTTGGAAGGAACAGTGAGGTTTCGAGGAATTCGGTTCCACTTGGACCCTTTACGGGGTATGCTTCGATATTGAAGGAATCGCGGTTCTTGAAACCTGCACAGCAATTATTGGAAGAGTTATGTGATGGTGGGGTTCGTGAAATTTACGCTACCGAGAAGTCTCTTGCTCCTGATGCATCGTTGATGGAACCTCCTCATGAGGGTTTGAGTGCCGGTGGAGTTGTTGGTGGGGATGATCCACTAGGGGACTATGAAAATGAGAGTAGGAAGAAGAAGTGTAGATTATTAACCATGCTTGACGAGATGCTTGTATTTGGTGGTATAGATGACCTCGGTGAACTTGGTTATCTTTTTGGAAAAGTTATTGGCAGGGAATATATGCACGAAGATTGGGAGTGTAAAGTTTACAGGAGGTACAGGCAGTATTATCAACAGATGCATGCAGTGATAACATCATTCGAGTATGTTTCTGGTCTTGGTAATGCAGCCCCATATGCAAGTTTGGCTATAAATGCCATGTCCAAACATTTTAAATGCTTGAAGAATGCTATCACTGACCAGCTTCAGTTCATCAACAAGGCTCCGTTTCAGATTAGTAACAGAAAGGATGAATCTCCAAGGCTGCACAACAGTGATAGGGGCACTTACAGCCAAAGGCCAGGGTTTCTTGAGCACCAGCAGCCTGTTTGGCGACCTCAAAGAGGACTTCCTGAGCGTGCTGTCAGTGTTCTCAGGGCCTGGTTGTTTGAACACTTTCTTCACCCTTACCCTACTGATACCGACAAGCTTATGTTGGCTAAACAAACTGGTCTATCTCGCAACCAGGTGTCTAATTGGTTTATTAATGCAAGAGTAAGGCTTTGGAAGCCAATGGTGGAAGAAATACACATGCTAGAATCACAGCAAGCTCAGAAAAGGCCACAGAGGGAAGAACAAAGTAGGAGAAACTTAAGTGGTGGTGATCATTTACCTTCAGACAACTCTCTTGTTACTGAGAATATTCCATCTACCTCCATGGAGAAGTTTCAGGATGCCCCTTATAAACAACACAGAAATGAAATTGCTAATATGCAAGTGAGGGGTCAAGAACAGCTGAATCAAACGAACACAAGCAATCAGCAAATGGGTGTTGGAGTGAGCATTAATAATGGTGTGTCTCTCACACTTGGTCTTCATCAAAATCATGGTATTGGTTTGTCTGAGCCCTTTGCCATGAGTGCAGCTCAACGTTTTGGTGTTGCCCTTCAGCCTGAGGGCTATGTTATAAGTGGTTTTGAATCACAAAATCGACATTTTGGAAGAGATGTTATTGGAGGAGGGCAACTGTTGCATGATTTTGTAGGCTGA 4077 0.4454 MNLEVNGEEGDEKKWVHDSSVDHKGKVPLRASTGSWKAAFFIIAIETSERLSFFGIATSLVLYLTKVMHHDLKTAARNVNYWSGVTTLMPLFGGFIADSYMGRYTTVLASSIFYLMGLILLTLSWFLPSLKPCDDTGLCTKPRRIHEVVFFLAIYLISFGTGGHKPSLESFGADQFDEDHDEERRQKMSFFNWWNCALCTGLIVGVTLIVYIQDNISWGAADIIFTVVMVFSLIIFVLGRTFYRYRVPTGSPLTPMLQVLVASFSKRKLPHPSDPAQLYEVPKSIGINKRFLCHTNKLKFLDKAAILVNDGSLAEKQSPWNLSTVTKVEETKLIINMIPIWVSTIPFGICVAQTATFFVKQGTTLNRKIGNGFEIPPASIFTVSALGMVVSVAIYDKILVPVLRRVTQNERGINILQRIGFGMLFCIAAMIAAALVERKRLEAVERDPLKGSLTMSIFWLAPQFLIIGFGDGFTLVGLQEYFYDQVPDSMRSLGIAFYLSVMGAASFLSSMLITVVDHMTEKSGSKSWFGKDLNSSRLDKFYWLLAAMSTLNLFLFAFLASRFSYKRVQKVAVADCYEDKSDYESVETKNGEEKTLGVCTGPGAMNGENDEGDEEGKIGIYDFSGVQEEKLPHSRCCLRRWLNLWAPWSPLLLVSMPRRSTIVVVAIALASPTRRCTTTVVATTLASPTHRCNIATATVATASHHHFHYSSLQLPSPLLLHSLSLFSFFICNIITNYTNPSLFNFLFFSMAEGFEHYHVPQQSRRDKLRVFPQNHPSFLESSSILLPTSPNLTSLYDPSLLPSDFLACATQQPPAAKGEGSNLMMGFLEGGVVNGDAIHVINSNTNHHHNNPFLYQLQNLREFGDGYNDASEMMVFKPEPLSLSLSSQSNNTHHPLELNLQRFGAVIPGLVGRNSEVSRNSVPLGPFTGYASILKESRFLKPAQQLLEELCDGGVREIYATEKSLAPDASLMEPPHEGLSAGGVVGGDDPLGDYENESRKKKCRLLTMLDEMLVFGGIDDLGELGYLFGKVIGREYMHEDWECKVYRRYRQYYQQMHAVITSFEYVSGLGNAAPYASLAINAMSKHFKCLKNAITDQLQFINKAPFQISNRKDESPRLHNSDRGTYSQRPGFLEHQQPVWRPQRGLPERAVSVLRAWLFEHFLHPYPTDTDKLMLAKQTGLSRNQVSNWFINARVRLWKPMVEEIHMLESQQAQKRPQREEQSRRNLSGGDHLPSDNSLVTENIPSTSMEKFQDAPYKQHRNEIANMQVRGQEQLNQTNTSNQQMGVGVSINNGVSLTLGLHQNHGIGLSEPFAMSAAQRFGVALQPEGYVISGFESQNRHFGRDVIGGGQLLHDFVG 1358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01295 1358 FunFam BEL1-like homeodomain protein 9 1143 1205 - -
Vian2g01295 1358 SMART HOX_1 1140 1204 IPR001356 GO:0003677
Vian2g01295 1358 MobiDBLite consensus disorder prediction 1111 1139 - -
Vian2g01295 1358 Pfam Homeobox KN domain 1157 1196 IPR008422 GO:0003677|GO:0006355
Vian2g01295 1358 MobiDBLite consensus disorder prediction 1209 1243 - -
Vian2g01295 1358 Pfam POT family 104 528 IPR000109 GO:0016020|GO:0022857|GO:0055085
Vian2g01295 1358 ProSiteProfiles 'Homeobox' domain profile. 1137 1200 IPR001356 GO:0003677
Vian2g01295 1358 Pfam Associated with HOX 933 1095 IPR006563 -
Vian2g01295 1358 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 1. 93 117 IPR018456 GO:0006857|GO:0016020|GO:0022857
Vian2g01295 1358 CDD MFS_NPF5 36 565 IPR044739 GO:0042937|GO:0042938|GO:0071916
Vian2g01295 1358 SUPERFAMILY Homeodomain-like 1142 1207 IPR009057 -
Vian2g01295 1358 MobiDBLite consensus disorder prediction 1228 1243 - -
Vian2g01295 1358 SUPERFAMILY MFS general substrate transporter 32 564 IPR036259 -
Vian2g01295 1358 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 34 564 - -
Vian2g01295 1358 Gene3D MFS general substrate transporter like domains 8 572 IPR036259 -
Vian2g01295 1358 MobiDBLite consensus disorder prediction 1209 1227 - -
Vian2g01295 1358 SMART prehox3 928 1096 IPR006563 -
Vian2g01295 1358 Gene3D - 1143 1205 - -
Vian2g01295 1358 CDD homeodomain 1140 1201 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01295 Vian-Chr2 26731851 26750456 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01295 11 595 Organic Solute Cotransporters AT3G53960 60.000 0.0 755
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Vian2g01295 PTR2 5.4e-93 CL0015
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01295 K26562 - gmx:100801757 1038.48