Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01280 ATGGAAGCCACTTCCATAACTTCGTTGTTGAAGGGCTTTTGTGATCACACACGATGGAAATATGCTGTTTTTTGGAAGCTTAACCACCATTTTCCTATGAATTTGACCTGGGAAAATGGTTACCAGAAAGGAAATGAGGTTGAGGAAAGTATGTGGGATGAGGTCAATTTCAAATCCCCAGATGAGTTATATTCTTCAAGAGGTGAAAGTACTGATTATTCAGGAGATTATTCAGTTCGACTTCTCATGATTGAAATGTCCCATCGTAAATACAATTTGGGAGAAGGGGTTGTTGGTAAAGTAGCTCTTGCCAGGGATCATTGTTGGGTTTCCTGTGAGGATATTCTTACCCCTAAATTTGACACTGATTTAATCACAGAGTGTCCTGATGAGTGGCTTCTTCAGATTGCATGTGGCATCAAGACTATTGTGTTTGTACCGGTTCTTCCTCTAGGGGTTTTGCAGTTTGGTTCATTTGAAGAGGTTGCTGAAGACCTGGAATTCGTTACCACTGTGAAGGGTAAGCTCCAATCCATTGATAGCATGGAAGCAAACATTACCCCTTTGAACATGGGAACTGATTATCAAGATTGGTCGGACCTAATGCATAATTTGATGAATAGCTTGGACGAATCATCTTCTGTTACTAAAACCATATGGAAAAGTGAAGTTTCAACCAGTACTGCTTCGAACAGTGCAAATGGTTCAACAAGGCTGAACCCAACAATGCTATCATTTATTCAAGATGACTGTTCTGTGTCAAGACAAAATCTACTAAAATCTCTGAAAAGAGAAAATGTCAATGAGATAGGTTCTTCTTCATTTGATATGTCAACTGTTCCTAGACATATTAGTAAGATGGAGACAAAACCAAATCACATGGAAGCAGAGATGTGGTCCTGGTCAGTTTTTGAAGAGATGTCAAACGGATTAGACTCTTTGTCTGTTAAAAATATGACAGAGAAACAGTTTGGAGGCACTGAAAGTGGTTATTATGATGCTACGAATATCAATGACTTCACTTTTCCCTCAGAGTCAGAATTGCACAAAGCACTTGGATCAGTTGCATACTCTGTTGGTGAAGCATACCATACCTCATGTCTGATAACCAATAAAAAAGAGAGTGATCATTTTAAAGGTTTTGAGTTTCCCGAAGATCTTGATCCTGAATATCTTTTAGATGCTGTTGTTGGCAATTTATGTAGTGCTGCAGATGATACTTCTAGTATTTCAAACAGTATCAGATCTTTTACAACTTTGCCAACAGAGATTAGTGGTTCCATTCCAAATAATTATTCAGAAGAAAGTTACACTTTGATTGTGGATAATTCGGATGTGAAGAATGATCTTGTGCCTACAGTTTCCTTCAAGAGAAAATATGAATTTTCTAACCATTTTACATCATCTTTTGATGGAAATGGAAGCTTATTGATTGATGAGGTGCCACAGGAAAAGGAAGATGGTCATATGCTTCCTATCAGTGGACCAAAGCTCTCTAGCACAAACAAGAAAAGAACAAGAGTTGCTAACAACCAAAAGGCAAGGCCAAGAGACAGACAGCTTATCATGGACAGAATGAAGGAGTTGAGAGAACTTGTCCCAGATGGTGGAAGGTGTAGCATTGACAACCTCTTGGAACGGACCATAAAGCACATGCTCTACTTGAGAAAAATAACAAGTCAGGCCGAGAAACTAAAACGATTTGCCAATCGGACGGTTGGTGAGAGCAAAAGACAGAAAATGAACGGTAGCCACCCAGGAAGGAGCTGTGCATTTGACTTTGAAAGTGAACTAGCATGGCCTATAGTCATAGAAGATCTGGAATGCACAGGGCAAATGCTCATTGAGATGATATGCAATGAGCATGGCCTTTTCTTGGAGATTGCTCAGGTGATCCGAAAGCTGGATGTCACCATCTTGAAAGGGATCTTGGAAAACCGTTCTAGCGACAGCTGGGCTTGTTTCATTGTTGAGGTTCCTAGAGGTTTTCACAGAATGGATGTTCTATGTCCATTACTGCATCTTCTGCAGCTGAGGAGAAACCCTATCTCATACAAAAGCTGA 2064 0.3987 MEATSITSLLKGFCDHTRWKYAVFWKLNHHFPMNLTWENGYQKGNEVEESMWDEVNFKSPDELYSSRGESTDYSGDYSVRLLMIEMSHRKYNLGEGVVGKVALARDHCWVSCEDILTPKFDTDLITECPDEWLLQIACGIKTIVFVPVLPLGVLQFGSFEEVAEDLEFVTTVKGKLQSIDSMEANITPLNMGTDYQDWSDLMHNLMNSLDESSSVTKTIWKSEVSTSTASNSANGSTRLNPTMLSFIQDDCSVSRQNLLKSLKRENVNEIGSSSFDMSTVPRHISKMETKPNHMEAEMWSWSVFEEMSNGLDSLSVKNMTEKQFGGTESGYYDATNINDFTFPSESELHKALGSVAYSVGEAYHTSCLITNKKESDHFKGFEFPEDLDPEYLLDAVVGNLCSAADDTSSISNSIRSFTTLPTEISGSIPNNYSEESYTLIVDNSDVKNDLVPTVSFKRKYEFSNHFTSSFDGNGSLLIDEVPQEKEDGHMLPISGPKLSSTNKKRTRVANNQKARPRDRQLIMDRMKELRELVPDGGRCSIDNLLERTIKHMLYLRKITSQAEKLKRFANRTVGESKRQKMNGSHPGRSCAFDFESELAWPIVIEDLECTGQMLIEMICNEHGLFLEIAQVIRKLDVTILKGILENRSSDSWACFIVEVPRGFHRMDVLCPLLHLLQLRRNPISYKS 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01280 687 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 506 555 IPR011598 GO:0046983
Vian2g01280 687 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 319 682 IPR043561 GO:0003700|GO:0006355
Vian2g01280 687 MobiDBLite consensus disorder prediction 487 515 - -
Vian2g01280 687 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 9 173 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01280 Vian-Chr2 26390749 26395542 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01280 320 681 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 34.872 3.00e-50 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01280 - - gmx:100820605 1038.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01280 2 26390749 26395542 Vian2g01280 2 26390749 26395542 ECH