Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01243 ATGGTTGAATCAGCCATGTCAAAGACAATGATGGAGGAAGTAATGGCAACATGGTCAGAGGGGTCAGAGGAAGATGAGCTTGTGAGAGAGCTTTTGGATGATGGGTCTCCCCTTCTTATGGTGCCTCAGGAGCCAATTCAAAACCCCATAACAAAACCATCTTCAACTCACCATGCCTTTAATAGCTTCCTCTCCAACATTTACTCAGGTCCTACTATCTCAGATATTGAAAATGCTTTGTCAGTCACCAACCAAGGAGACCACTTCCCACCACTCTCATCACCCAGAGTTTCCATATTGGAGAGGGGTTTGAGCAAGATTGAGAATAAGTATACCCTCAAAATCAAATGCTTTGGCAATGGGATGGGAGATGATGGATATAAGTGGAGGAAGTATGGACAGAAATCCATTAAGAATAGCCCAAATCCTAGGAGTTACTATAGGTGCACAAACCCAAGGTGCAGTGCCAAGAAGCAGGTTGAGAGATCCATTGAAGACCCAGACACTCTTATCATAACCTATGAAGGGCTCCACTTGCACTTTGCTTATCCATATTTTCTCATGGGCCAACCCGACCAATCTCAATCCCATCAACCCATCAAGAAGTCCAAGCCCACTTCTTCACAGGACCAAGCCCAAGTCCATATAGAAGATTATGTTCATGAGGCCCAATCAAGTGCCACTTCGGGTGTGCTGCCATCCACTTCATTGGACTCTCCACAAGACATGGCCCAGGAAAACTTGGGCTCACAAGGGTTGCTTGAAGACATGGTGCCATTCATGGTTCGGAACCCAGCAAACAGTGTGAGCAGTGCTCACACAAATTTTTCTTGTTCTTCGTTTCGTTCTCCTCCGACCTCACCTCTGTGGCTTAAATTCTAG 882 0.458 MVESAMSKTMMEEVMATWSEGSEEDELVRELLDDGSPLLMVPQEPIQNPITKPSSTHHAFNSFLSNIYSGPTISDIENALSVTNQGDHFPPLSSPRVSILERGLSKIENKYTLKIKCFGNGMGDDGYKWRKYGQKSIKNSPNPRSYYRCTNPRCSAKKQVERSIEDPDTLIITYEGLHLHFAYPYFLMGQPDQSQSHQPIKKSKPTSSQDQAQVHIEDYVHEAQSSATSGVLPSTSLDSPQDMAQENLGSQGLLEDMVPFMVRNPANSVSSAHTNFSCSSFRSPPTSPLWLKF 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01243 293 Gene3D WRKY domain 119 176 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vian2g01243 293 MobiDBLite consensus disorder prediction 192 211 - -
Vian2g01243 293 Pfam WRKY DNA -binding domain 124 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vian2g01243 293 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 100 207 IPR044810 GO:0003700
Vian2g01243 293 SMART WRKY_cls 123 182 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vian2g01243 293 ProSiteProfiles WRKY domain profile. 118 183 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vian2g01243 293 FunFam WRKY transcription factor 110 184 - -
Vian2g01243 293 SUPERFAMILY WRKY DNA-binding domain 121 180 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01243 Vian-Chr2 25718733 25720938 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01243 11 264 WRKY Transcription Factor Family AT5G43290 42.391 2.60e-54 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vian2g01243 WRKY 1.8e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01243 - - gmx:100803946 469.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01243 2 25718733 25720938 Vian2g01243 2 25718733 25720938 ECH