Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vian2g01243 | ATGGTTGAATCAGCCATGTCAAAGACAATGATGGAGGAAGTAATGGCAACATGGTCAGAGGGGTCAGAGGAAGATGAGCTTGTGAGAGAGCTTTTGGATGATGGGTCTCCCCTTCTTATGGTGCCTCAGGAGCCAATTCAAAACCCCATAACAAAACCATCTTCAACTCACCATGCCTTTAATAGCTTCCTCTCCAACATTTACTCAGGTCCTACTATCTCAGATATTGAAAATGCTTTGTCAGTCACCAACCAAGGAGACCACTTCCCACCACTCTCATCACCCAGAGTTTCCATATTGGAGAGGGGTTTGAGCAAGATTGAGAATAAGTATACCCTCAAAATCAAATGCTTTGGCAATGGGATGGGAGATGATGGATATAAGTGGAGGAAGTATGGACAGAAATCCATTAAGAATAGCCCAAATCCTAGGAGTTACTATAGGTGCACAAACCCAAGGTGCAGTGCCAAGAAGCAGGTTGAGAGATCCATTGAAGACCCAGACACTCTTATCATAACCTATGAAGGGCTCCACTTGCACTTTGCTTATCCATATTTTCTCATGGGCCAACCCGACCAATCTCAATCCCATCAACCCATCAAGAAGTCCAAGCCCACTTCTTCACAGGACCAAGCCCAAGTCCATATAGAAGATTATGTTCATGAGGCCCAATCAAGTGCCACTTCGGGTGTGCTGCCATCCACTTCATTGGACTCTCCACAAGACATGGCCCAGGAAAACTTGGGCTCACAAGGGTTGCTTGAAGACATGGTGCCATTCATGGTTCGGAACCCAGCAAACAGTGTGAGCAGTGCTCACACAAATTTTTCTTGTTCTTCGTTTCGTTCTCCTCCGACCTCACCTCTGTGGCTTAAATTCTAG | 882 | 0.458 | MVESAMSKTMMEEVMATWSEGSEEDELVRELLDDGSPLLMVPQEPIQNPITKPSSTHHAFNSFLSNIYSGPTISDIENALSVTNQGDHFPPLSSPRVSILERGLSKIENKYTLKIKCFGNGMGDDGYKWRKYGQKSIKNSPNPRSYYRCTNPRCSAKKQVERSIEDPDTLIITYEGLHLHFAYPYFLMGQPDQSQSHQPIKKSKPTSSQDQAQVHIEDYVHEAQSSATSGVLPSTSLDSPQDMAQENLGSQGLLEDMVPFMVRNPANSVSSAHTNFSCSSFRSPPTSPLWLKF | 293 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vian2g01243 | 293 | Gene3D | WRKY domain | 119 | 176 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Vian2g01243 | 293 | MobiDBLite | consensus disorder prediction | 192 | 211 | - | - | |
Vian2g01243 | 293 | Pfam | WRKY DNA -binding domain | 124 | 180 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vian2g01243 | 293 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 100 | 207 | IPR044810 | GO:0003700 | |
Vian2g01243 | 293 | SMART | WRKY_cls | 123 | 182 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vian2g01243 | 293 | ProSiteProfiles | WRKY domain profile. | 118 | 183 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vian2g01243 | 293 | FunFam | WRKY transcription factor | 110 | 184 | - | - | |
Vian2g01243 | 293 | SUPERFAMILY | WRKY DNA-binding domain | 121 | 180 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vian2g01243 | Vian-Chr2 | 25718733 | 25720938 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vian2g01243 | 11 | 264 | WRKY Transcription Factor Family | AT5G43290 | 42.391 | 2.60e-54 | 176 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Vian2g01243 | WRKY | 1.8e-25 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vian2g01243 | - | - | gmx:100803946 | 469.544 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vian2g01243 | 2 | 25718733 | 25720938 | Vian2g01243 | 2 | 25718733 | 25720938 | ECH |